RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PRDX5P30044 214 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 CAP2P40123 477 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 PTPN5P54829 565 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 GRB14Q14449 540 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 OLFML2BQ68BL8 750 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 ANKRD33Q7Z3H0 272 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 SLF2Q8IX21 1173 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 VGLL2Q8N8G2 317 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 TSR2Q969E8 191 aaKnown RBP7.83□□□□□ -1.16
HDAC6-210ENST00000441703 PHOX2BQ99453 314 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 WDR18Q9BV38 432 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 GBF1Q92538 1859 aa7.83□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L10C9JJH3 530 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 RFXAPO00287 272 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 TLR3O15455 904 aaKnown RBP7.82□□□□□ -1.16
HDAC6-210ENST00000441703 DCXO43602 365 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 GFRA3O60609 400 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 PDE8BO95263 885 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 RABGGTBP53611 331 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 C16orf59Q7L2K0 433 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 DZIP1Q86YF9 867 aaKnown RBP7.82□□□□□ -1.16
HDAC6-210ENST00000441703 NUP133Q8WUM0 1156 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 PPP1R12CQ9BZL4 782 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 IL23AQ9NPF7 189 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 DDX4Q9NQI0 724 aaKnown RBP7.82□□□□□ -1.16
HDAC6-210ENST00000441703 PCDHA11Q9Y5I1 949 aa7.82□□□□□ -1.16
HDAC6-210ENST00000441703 A0A0G2JMZ2 1700 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 ZBBXA8MT70 800 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 PGK1P00558 417 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 ASNSP08243 561 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 POU3F3P20264 500 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-210ENST00000441703 ADORA2AP29274 412 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 MCM4P33991 863 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 BTDP43251 543 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 PUM3Q15397 648 aaKnown RBP7.81□□□□□ -1.16
HDAC6-210ENST00000441703 PRAMEF19Q5SWL8 479 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 SAMD1Q6SPF0 538 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-210ENST00000441703 OTOP2Q7RTS6 562 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 FAM178BQ8IXR5 827 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 ZGPATQ8N5A5 531 aaKnown RBP7.81□□□□□ -1.16
HDAC6-210ENST00000441703 VTI1AQ96AJ9 217 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 TRIM34Q9BYJ4 488 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 CERS4Q9HA82 394 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 GNL3LQ9NVN8 582 aaKnown RBP7.81□□□□□ -1.16
HDAC6-210ENST00000441703 C9orf78Q9NZ63 289 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-210ENST00000441703 TBX21Q9UL17 535 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 SLC4A7Q9Y6M7 1214 aa7.81□□□□□ -1.16
HDAC6-210ENST00000441703 PRRC2BQ5JSZ5 2229 aaKnown RBP7.8□□□□□ -1.16
HDAC6-210ENST00000441703 GAKO14976 1311 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 SALL1Q9NSC2 1324 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 F6X3S4 739 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 CNMDO75829 334 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 ALDH1L1O75891 902 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 MYOGP15173 224 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 FGFR2P21802 821 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 RBM10P98175 930 aaKnown RBP7.8□□□□□ -1.16
HDAC6-210ENST00000441703 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 AAMPQ13685 434 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 RABL6Q3YEC7 729 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-210ENST00000441703 LRRC24Q50LG9 513 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 KRT40Q6A162 431 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 ERMP1Q7Z2K6 904 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
HDAC6-210ENST00000441703 SMAP1Q8IYB5 467 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-210ENST00000441703 ARNTL2Q8WYA1 636 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 KAZALD1Q96I82 304 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 SUCLG2Q96I99 432 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 FEZ1Q99689 392 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 PRRX2Q99811 253 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 HERC5Q9UII4 1024 aaKnown RBP7.8□□□□□ -1.16
HDAC6-210ENST00000441703 XIRP2A4UGR9 3374 aa7.8□□□□□ -1.16
HDAC6-210ENST00000441703 ZNF536O15090 1300 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 IL16Q14005 1332 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 STRNO43815 780 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 ATP2A2P16615 1042 aaKnown RBP7.79□□□□□ -1.16
HDAC6-210ENST00000441703 PTMSP20962 102 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 HFE2Q6ZVN8 426 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 CDCA7LQ96GN5 454 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 GLT1D1Q96MS3 346 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 TSEN34Q9BSV6 310 aaKnown RBP7.79□□□□□ -1.16
HDAC6-210ENST00000441703 DENND2AQ9ULE3 1009 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 ZDBF2Q9HCK1 2354 aa7.79□□□□□ -1.16
HDAC6-210ENST00000441703 SIPA1L1O43166 1804 aa7.78□□□□□ -1.16
HDAC6-210ENST00000441703 ZNF236Q9UL36 1845 aa7.78□□□□□ -1.16
HDAC6-210ENST00000441703 ZBTB22O15209 634 aa7.78□□□□□ -1.16
HDAC6-210ENST00000441703 NPM3O75607 178 aaKnown RBP7.78□□□□□ -1.16
HDAC6-210ENST00000441703 OFD1O75665 1012 aa7.78□□□□□ -1.16
HDAC6-210ENST00000441703 CA3P07451 260 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms