RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MYBL2P10244 700 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 MMS22LQ6ZRQ5 1243 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 HELBQ8NG08 1087 aaPredicted RBP22.88■■□□□ 1.25
SHOX2-203ENST00000441443 COG1Q8WTW3 980 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 MYCBPQ99417 103 aaPredicted RBP22.88■■□□□ 1.25
SHOX2-203ENST00000441443 CNNM1Q9NRU3 951 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 SRPRBQ9Y5M8 271 aaKnown RBP22.88■■□□□ 1.25
SHOX2-203ENST00000441443 SLC12A7Q9Y666 1083 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 CPP00450 1065 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 KRT9P35527 623 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 RILPL1Q5EBL4 403 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 CCDC51Q96ER9 411 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 CABP5Q9NP86 173 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 ZBTB1Q9Y2K1 713 aa22.88■■□□□ 1.25
SHOX2-203ENST00000441443 ATP1A1P05023 1023 aaKnown RBP22.87■■□□□ 1.25
SHOX2-203ENST00000441443 KRT31Q15323 416 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 CRACR2AQ9BSW2 395 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 GREM2Q9H772 168 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 TAB2Q9NYJ8 693 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 MYO1AQ9UBC5 1043 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 TRMT112Q9UI30 125 aaKnown RBP22.87■■□□□ 1.25
SHOX2-203ENST00000441443 REXO2Q9Y3B8 237 aaKnown RBP22.87■■□□□ 1.25
SHOX2-203ENST00000441443 PKD1L3Q7Z443 1732 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 MAP3K15Q6ZN16 1313 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 PPP1R3GB7ZBB8 358 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 TRAPPC11Q7Z392 1133 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 ERLIN2O94905 339 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 FMNL1O95466 1100 aaPredicted RBP22.87■■□□□ 1.25
SHOX2-203ENST00000441443 EIF5P55010 431 aaKnown RBP22.87■■□□□ 1.25
SHOX2-203ENST00000441443 PAGE5Q96GU1 130 aa22.87■■□□□ 1.25
SHOX2-203ENST00000441443 IFIT3O14879 490 aaKnown RBP22.86■■□□□ 1.25
SHOX2-203ENST00000441443 FECHP22830 423 aa22.86■■□□□ 1.25
SHOX2-203ENST00000441443 MAP9Q49MG5 647 aa22.86■■□□□ 1.25
SHOX2-203ENST00000441443 FAM205CA6NFA0 338 aa22.86■■□□□ 1.25
SHOX2-203ENST00000441443 AGPSO00116 658 aa22.86■■□□□ 1.25
SHOX2-203ENST00000441443 ADAMTS2O95450 1211 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 ITGA6P23229 1130 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 TTC19Q6DKK2 380 aaPredicted RBP22.85■■□□□ 1.25
SHOX2-203ENST00000441443 SUGP1Q8IWZ8 645 aaKnown RBP22.85■■□□□ 1.25
SHOX2-203ENST00000441443 ZNF579Q8NAF0 562 aaKnown RBP22.85■■□□□ 1.25
SHOX2-203ENST00000441443 TMEM87BQ96K49 555 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 ZKSCAN3Q9BRR0 538 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 KCPQ6ZWJ8 1503 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 MCTP2Q6DN12 878 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 FAM76AQ8TAV0 307 aa22.85■■□□□ 1.25
SHOX2-203ENST00000441443 EPN1Q9Y6I3 576 aaPredicted RBP22.85■■□□□ 1.25
SHOX2-203ENST00000441443 CIAO1O76071 339 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 FBXW10Q5XX13 1052 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 SLC4A9Q96Q91 983 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 SELENOOQ9BVL4 669 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 ZSWIM5Q9P217 1185 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 SAR1BQ9Y6B6 198 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 FAM169AQ9Y6X4 670 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 SNAP23O00161 211 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 IDH1O75874 414 aaKnown RBP22.84■■□□□ 1.25
SHOX2-203ENST00000441443 NDUFA10O95299 355 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 IRAK1P51617 712 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 CTDSPL2Q05D32 466 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 ACSBG1Q96GR2 724 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 GOLGA6CA6NDK9 693 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 GOLGA6DP0CG33 693 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 ZBTB38Q8NAP3 1195 aaPredicted RBP22.84■■□□□ 1.25
SHOX2-203ENST00000441443 BLZF1Q9H2G9 400 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 GOLGA6AQ9NYA3 693 aa22.84■■□□□ 1.25
SHOX2-203ENST00000441443 DDX60Q8IY21 1712 aaKnown RBP22.84■■□□□ 1.25
SHOX2-203ENST00000441443 ITIH6Q6UXX5 1313 aa22.83■■□□□ 1.25
SHOX2-203ENST00000441443 ECM29Q5VYK3 1845 aa22.83■■□□□ 1.25
SHOX2-203ENST00000441443 ZNF185O15231 689 aa22.83■■□□□ 1.24
SHOX2-203ENST00000441443 PCCAP05165 728 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-203ENST00000441443 MCAMP43121 646 aa22.83■■□□□ 1.24
SHOX2-203ENST00000441443 SGMS1Q86VZ5 419 aa22.83■■□□□ 1.24
SHOX2-203ENST00000441443 SYMPKQ92797 1274 aaKnown RBP22.83■■□□□ 1.24
SHOX2-203ENST00000441443 FOXP1Q9H334 677 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-203ENST00000441443 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.24
SHOX2-203ENST00000441443 EBAG9O00559 213 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 IRS4O14654 1257 aaPredicted RBP22.82■■□□□ 1.24
SHOX2-203ENST00000441443 IFNAR1P17181 557 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 GIGYF2Q6Y7W6 1299 aaKnown RBP22.82■■□□□ 1.24
SHOX2-203ENST00000441443 WASF1Q92558 559 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 GLI3P10071 1580 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 ADD2P35612 726 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 COPB1P53618 953 aaKnown RBP22.82■■□□□ 1.24
SHOX2-203ENST00000441443 RRP12Q5JTH9 1297 aaKnown RBP22.82■■□□□ 1.24
SHOX2-203ENST00000441443 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 TRIM22Q8IYM9 498 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 BCAS4Q8TDM0 211 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.82■■□□□ 1.24
SHOX2-203ENST00000441443 MAPK8IP1Q9UQF2 711 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 SHOX2O60902 331 aaPredicted RBP22.82■■□□□ 1.24
SHOX2-203ENST00000441443 CCDC122Q5T0U0 273 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 CAGE1Q8TC20 777 aa22.82■■□□□ 1.24
SHOX2-203ENST00000441443 RRAGBQ5VZM2 374 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 STK36Q9NRP7 1315 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 GOLGA6BA6NDN3 693 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 PSMD14O00487 310 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 MCM3P25205 808 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 MNAT1P51948 309 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 CEP131Q9UPN4 1083 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 SAMM50Q9Y512 469 aa22.81■■□□□ 1.24
SHOX2-203ENST00000441443 KDM4FA0A1W2PPD8 638 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms