RNA–Protein interactions for RNA: ENST00000440239.5

CHTF18-204, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 1 (best)

Gene CHTF18, Length 1,801 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-204ENST00000440239 TNKSO95271 1327 aa27.13■■□□□ 1.93
CHTF18-204ENST00000440239 PDHXO00330 501 aa27.13■■□□□ 1.93
CHTF18-204ENST00000440239 TRPA1O75762 1119 aa27.13■■□□□ 1.93
CHTF18-204ENST00000440239 COL9A3Q14050 684 aaPredicted RBP27.13■■□□□ 1.93
CHTF18-204ENST00000440239 GPAT2Q6NUI2 795 aa27.13■■□□□ 1.93
CHTF18-204ENST00000440239 JAKMIP1Q96N16 626 aaKnown RBP27.13■■□□□ 1.93
CHTF18-204ENST00000440239 VCPKMTQ9H867 229 aa27.13■■□□□ 1.93
CHTF18-204ENST00000440239 AGTPBP1Q9UPW5 1226 aa27.13■■□□□ 1.93
CHTF18-204ENST00000440239 LOC285556D6RIA3 1793 aa27.12■■□□□ 1.93
CHTF18-204ENST00000440239 KIAA1755Q5JYT7 1200 aa27.12■■□□□ 1.93
CHTF18-204ENST00000440239 ISY1Q9ULR0 285 aaKnown RBP27.12■■□□□ 1.93
CHTF18-204ENST00000440239 ERICH2A1L162 156 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 IFIT3O14879 490 aaKnown RBP27.11■■□□□ 1.93
CHTF18-204ENST00000440239 VCAM1P19320 739 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 MCM5P33992 734 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 TSGA10IPQ3SY00 556 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 ANKRD23Q86SG2 305 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 PRC1O43663 620 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 SART3Q15020 963 aaKnown RBP27.11■■□□□ 1.93
CHTF18-204ENST00000440239 CCDC178Q5BJE1 867 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 ENAHQ8N8S7 591 aaPredicted RBP27.11■■□□□ 1.93
CHTF18-204ENST00000440239 JMYQ8N9B5 988 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 KCNB2Q92953 911 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 MKL1Q969V6 931 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 TMEM47Q9BQJ4 181 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 RNF186Q9NXI6 227 aa27.11■■□□□ 1.93
CHTF18-204ENST00000440239 F5H6K3 240 aa27.1■■□□□ 1.93
CHTF18-204ENST00000440239 ANTXR2P58335 489 aa27.1■■□□□ 1.93
CHTF18-204ENST00000440239 KLRC3Q07444 240 aa27.1■■□□□ 1.93
CHTF18-204ENST00000440239 TAF1CQ15572 869 aaPredicted RBP27.1■■□□□ 1.93
CHTF18-204ENST00000440239 RCSD1Q6JBY9 416 aa27.1■■□□□ 1.93
CHTF18-204ENST00000440239 LRRC2Q9BYS8 371 aa27.1■■□□□ 1.93
CHTF18-204ENST00000440239 RPAP3Q9H6T3 665 aaPredicted RBP27.1■■□□□ 1.93
CHTF18-204ENST00000440239 TOP1P11387 765 aaKnown RBP27.09■■□□□ 1.93
CHTF18-204ENST00000440239 IFIT1BQ5T764 474 aaKnown RBP27.09■■□□□ 1.93
CHTF18-204ENST00000440239 SAMD1Q6SPF0 538 aaPredicted RBP27.09■■□□□ 1.93
CHTF18-204ENST00000440239 C12orf42Q96LP6 360 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 TCEANC2Q96MN5 208 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 TTC14Q96N46 770 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 TANGO6Q9C0B7 1094 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 ALDH1A1P00352 501 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 CPA1P15085 419 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 TMEM67Q5HYA8 995 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 DGKHQ86XP1 1220 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 LPAR1Q92633 364 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 NUP88Q99567 741 aaPredicted RBP27.09■■□□□ 1.93
CHTF18-204ENST00000440239 KAT14Q9H8E8 782 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 WBP1LQ9NX94 342 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 TSKSQ9UJT2 592 aa27.09■■□□□ 1.93
CHTF18-204ENST00000440239 NDUFB10O96000 172 aa27.08■■□□□ 1.93
CHTF18-204ENST00000440239 CYP2C8P10632 490 aa27.08■■□□□ 1.93
CHTF18-204ENST00000440239 PABPC4Q13310 644 aaKnown RBP eCLIP27.08■■□□□ 1.93
CHTF18-204ENST00000440239 SLFN13Q68D06 897 aa27.08■■□□□ 1.93
CHTF18-204ENST00000440239 TBC1D8O95759 1140 aa27.07■■□□□ 1.92
CHTF18-204ENST00000440239 CASTP20810 708 aaKnown RBP27.07■■□□□ 1.92
CHTF18-204ENST00000440239 IRX3P78415 501 aaPredicted RBP27.07■■□□□ 1.92
CHTF18-204ENST00000440239 WTAPQ15007 396 aa27.07■■□□□ 1.92
CHTF18-204ENST00000440239 OSBPP22059 807 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 PSMA5P28066 241 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 FAM83BQ5T0W9 1011 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 BLOC1S2Q6QNY1 142 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 NOVP48745 357 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 CRHR2Q13324 411 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 RASGRP2Q7LDG7 609 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 GMCL1P1Q8NEA9 526 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 UPF2Q9HAU5 1272 aaKnown RBP27.06■■□□□ 1.92
CHTF18-204ENST00000440239 GPHNQ9NQX3 736 aaPredicted RBP27.06■■□□□ 1.92
CHTF18-204ENST00000440239 PNMA3Q9UL41 463 aa27.06■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L15C9J2P7 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L13C9JLJ4 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L11C9JVI0 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L18D6R9N7 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L22D6RA61 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L17D6RBQ6 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L19D6RCP7 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L20D6RJB6 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 WDR46O15213 610 aaKnown RBP27.05■■□□□ 1.92
CHTF18-204ENST00000440239 HMGB1P09429 215 aaKnown RBP27.05■■□□□ 1.92
CHTF18-204ENST00000440239 USP17L24Q0WX57 530 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 SEC23AQ15436 765 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 DHX32Q7L7V1 743 aaKnown RBP27.05■■□□□ 1.92
CHTF18-204ENST00000440239 PNMA1Q8ND90 353 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 SMCR8Q8TEV9 937 aaPredicted RBP27.05■■□□□ 1.92
CHTF18-204ENST00000440239 PARK7Q99497 189 aaKnown RBP27.05■■□□□ 1.92
CHTF18-204ENST00000440239 ASCC2Q9H1I8 757 aaPredicted RBP27.05■■□□□ 1.92
CHTF18-204ENST00000440239 SENP2Q9HC62 589 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 ZFYVE28Q9HCC9 887 aa27.05■■□□□ 1.92
CHTF18-204ENST00000440239 SLC1A4P43007 532 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 FGD1P98174 961 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 SYNPO2Q9UMS6 1093 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 HSPA1AP0DMV8 641 aaKnown RBP27.04■■□□□ 1.92
CHTF18-204ENST00000440239 HSPA1BP0DMV9 641 aaKnown RBP27.04■■□□□ 1.92
CHTF18-204ENST00000440239 CCDC96Q2M329 555 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 NFXL1Q6ZNB6 911 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 IGDCC4Q8TDY8 1250 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 ZCCHC17Q9NP64 241 aaKnown RBP27.04■■□□□ 1.92
CHTF18-204ENST00000440239 SLC45A1Q9Y2W3 748 aa27.04■■□□□ 1.92
CHTF18-204ENST00000440239 CA12O43570 354 aa27.03■■□□□ 1.92
CHTF18-204ENST00000440239 HOXA7P31268 230 aaPredicted RBP27.03■■□□□ 1.92
CHTF18-204ENST00000440239 CATSPERGQ6ZRH7 1159 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms