RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ZKSCAN3Q9BRR0 538 aa19.07■□□□□ 0.64
SNRPB-202ENST00000438552 CFHR5Q9BXR6 569 aa19.07■□□□□ 0.64
SNRPB-202ENST00000438552 KRT23Q9C075 422 aa19.07■□□□□ 0.64
SNRPB-202ENST00000438552 VCPKMTQ9H867 229 aa19.07■□□□□ 0.64
SNRPB-202ENST00000438552 STX8Q9UNK0 236 aa19.07■□□□□ 0.64
SNRPB-202ENST00000438552 RLFQ13129 1914 aa19.07■□□□□ 0.64
SNRPB-202ENST00000438552 A0A0G2JMZ2 1700 aa19.06■□□□□ 0.64
SNRPB-202ENST00000438552 CTCFP49711 727 aaPredicted RBP19.06■□□□□ 0.64
SNRPB-202ENST00000438552 PARK7Q99497 189 aaKnown RBP19.06■□□□□ 0.64
SNRPB-202ENST00000438552 GOPCQ9HD26 462 aa19.06■□□□□ 0.64
SNRPB-202ENST00000438552 SLC45A1Q9Y2W3 748 aa19.06■□□□□ 0.64
SNRPB-202ENST00000438552 CASP8AP2Q9UKL3 1982 aa19.06■□□□□ 0.64
SNRPB-202ENST00000438552 ADGRA2Q96PE1 1338 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 LBX1P52954 281 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 TRDNQ13061 729 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 PABPC4Q13310 644 aaKnown RBP eCLIP19.05■□□□□ 0.646e-8■■□□□ 13.9
SNRPB-202ENST00000438552 CYB5R4Q7L1T6 521 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 RALYLQ86SE5 291 aaKnown RBP19.05■□□□□ 0.64
SNRPB-202ENST00000438552 ASCC2Q9H1I8 757 aaPredicted RBP19.05■□□□□ 0.64
SNRPB-202ENST00000438552 RPAP3Q9H6T3 665 aaPredicted RBP19.05■□□□□ 0.64
SNRPB-202ENST00000438552 ZFYVE28Q9HCC9 887 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 ZSWIM5Q9P217 1185 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 PNMA3Q9UL41 463 aa19.05■□□□□ 0.64
SNRPB-202ENST00000438552 IRX3P78415 501 aaPredicted RBP19.04■□□□□ 0.64
SNRPB-202ENST00000438552 LPAR1Q92633 364 aa19.04■□□□□ 0.64
SNRPB-202ENST00000438552 TANGO6Q9C0B7 1094 aa19.04■□□□□ 0.64
SNRPB-202ENST00000438552 TCP11L1Q9NUJ3 509 aa19.04■□□□□ 0.64
SNRPB-202ENST00000438552 COL11A1P12107 1806 aaPredicted RBP19.04■□□□□ 0.64
SNRPB-202ENST00000438552 NDUFB10O96000 172 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 OSBPP22059 807 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 HOXA7P31268 230 aaPredicted RBP19.03■□□□□ 0.64
SNRPB-202ENST00000438552 NOVP48745 357 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 NT5C2P49902 561 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
SNRPB-202ENST00000438552 PPP4R3BQ5MIZ7 849 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 RNF20Q5VTR2 975 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 RCSD1Q6JBY9 416 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 RASGRP2Q7LDG7 609 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 IQCA1Q86XH1 822 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 NCOA7Q8NI08 942 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 SMCR8Q8TEV9 937 aaPredicted RBP19.03■□□□□ 0.64
SNRPB-202ENST00000438552 MKL1Q969V6 931 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 CHMP4CQ96CF2 233 aa19.03■□□□□ 0.64
SNRPB-202ENST00000438552 NUP88Q99567 741 aaPredicted RBP19.03■□□□□ 0.64
SNRPB-202ENST00000438552 TNKSO95271 1327 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L15C9J2P7 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L13C9JLJ4 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L11C9JVI0 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L18D6R9N7 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L22D6RA61 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L17D6RBQ6 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L19D6RCP7 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L20D6RJB6 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 F5H6K3 240 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 GPR25O00155 361 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 WDR46O15213 610 aaKnown RBP19.02■□□□□ 0.64
SNRPB-202ENST00000438552 TLR2O60603 784 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 KLRC3Q07444 240 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 USP17L24Q0WX57 530 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 FAM83BQ5T0W9 1011 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 MB21D2Q8IYB1 491 aaPredicted RBP19.02■□□□□ 0.64
SNRPB-202ENST00000438552 RASEFQ8IZ41 740 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
SNRPB-202ENST00000438552 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 ZSCAN10Q96SZ4 725 aaPredicted RBP19.02■□□□□ 0.64
SNRPB-202ENST00000438552 TMEM47Q9BQJ4 181 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 UBAC1Q9BSL1 405 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 CPA4Q9UI42 421 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 SYNPO2Q9UMS6 1093 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 MTMR7Q9Y216 660 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 MGAMO43451 1857 aa19.02■□□□□ 0.64
SNRPB-202ENST00000438552 HSPA4P34932 840 aa19.01■□□□□ 0.63
SNRPB-202ENST00000438552 ANTXR2P58335 489 aa19.01■□□□□ 0.63
SNRPB-202ENST00000438552 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
SNRPB-202ENST00000438552 CHST3Q7LGC8 479 aa19.01■□□□□ 0.63
SNRPB-202ENST00000438552 TOP1P11387 765 aaKnown RBP19■□□□□ 0.63
SNRPB-202ENST00000438552 HERVK_113P62684 666 aa19■□□□□ 0.63
SNRPB-202ENST00000438552 C8orf34Q49A92 452 aa19■□□□□ 0.63
SNRPB-202ENST00000438552 SLFN13Q68D06 897 aa19■□□□□ 0.63
SNRPB-202ENST00000438552 ZNF296Q8WUU4 475 aaPredicted RBP19■□□□□ 0.63
SNRPB-202ENST00000438552 P2RX7Q99572 595 aaKnown RBP19■□□□□ 0.63
SNRPB-202ENST00000438552 USP26Q9BXU7 913 aa19■□□□□ 0.63
SNRPB-202ENST00000438552 PEX10O60683 326 aa18.99■□□□□ 0.63
SNRPB-202ENST00000438552 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
SNRPB-202ENST00000438552 ADCK5Q3MIX3 580 aa18.99■□□□□ 0.63
SNRPB-202ENST00000438552 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
SNRPB-202ENST00000438552 C17orf99Q6UX52 265 aa18.99■□□□□ 0.63
SNRPB-202ENST00000438552 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
SNRPB-202ENST00000438552 ISY1Q9ULR0 285 aaKnown RBP18.99■□□□□ 0.63
SNRPB-202ENST00000438552 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
SNRPB-202ENST00000438552 SPDYE16A6NNV3 312 aaPredicted RBP18.98■□□□□ 0.63
SNRPB-202ENST00000438552 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
SNRPB-202ENST00000438552 PRC1O43663 620 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 FKTNO75072 461 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 FLOT1O75955 427 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 SEC24BO95487 1268 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 BCRP11274 1271 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 SEC23AQ15436 765 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
SNRPB-202ENST00000438552 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms