RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	USP17L13	C9JLJ4	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L11	C9JVI0	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L18	D6R9N7	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L22	D6RA61	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L17	D6RBQ6	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L19	D6RCP7	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L20	D6RJB6	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	USP17L24	Q0WX57	530 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	C12orf60	Q5U649	245 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	CATSPERG	Q6ZRH7	1159 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	GPR142	Q7Z601	462 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	PLEKHH3	Q7Z736	793 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	DYNLL2	Q96FJ2	89 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	GPATCH3	Q96I76	525 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	PORCN	Q9H237	461 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738	MTMR10	Q9NXD2	777 aa		21.34	■■□□□ 1.01
MRPL28-203	ENST00000429738		A0A1W2PRG0	241 aa		21.33	■■□□□ 1.01
MRPL28-203	ENST00000429738	SMIM22	K7EJ46	135 aa		21.33	■■□□□ 1.01
MRPL28-203	ENST00000429738	CCND3	P30281	292 aa	Predicted RBP	21.33	■■□□□ 1.01
MRPL28-203	ENST00000429738	TSHZ3	Q63HK5	1081 aa		21.33	■■□□□ 1.01
MRPL28-203	ENST00000429738	LBX2	Q6XYB7	198 aa		21.33	■■□□□ 1.01
MRPL28-203	ENST00000429738	TMEM179	Q6ZVK1	233 aa		21.33	■■□□□ 1.01
MRPL28-203	ENST00000429738	RLF	Q13129	1914 aa		21.32	■■□□□ 1
MRPL28-203	ENST00000429738	USP17L12	C9JPN9	530 aa		21.32	■■□□□ 1
MRPL28-203	ENST00000429738	USP17L21	D6R901	530 aa		21.32	■■□□□ 1
MRPL28-203	ENST00000429738	CCL14	Q16627	93 aa		21.32	■■□□□ 1
MRPL28-203	ENST00000429738	PAGR1	Q9BTK6	254 aa		21.32	■■□□□ 1
MRPL28-203	ENST00000429738	SLC4A4	Q9Y6R1	1079 aa		21.32	■■□□□ 1
MRPL28-203	ENST00000429738	TTC41P	Q6P2S7	1318 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	CYP2D7	A0A087X1C5	515 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	MPHOSPH10	O00566	681 aa	Known RBP	21.31	■■□□□ 1
MRPL28-203	ENST00000429738	CNMD	O75829	334 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	LRRC26	Q2I0M4	334 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	CTR9	Q6PD62	1173 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	C16orf86	Q6ZW13	317 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	STRBP	Q96SI9	672 aa	Known RBP	21.31	■■□□□ 1
MRPL28-203	ENST00000429738	APBA2	Q99767	749 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	RABGAP1	Q9Y3P9	1069 aa		21.31	■■□□□ 1
MRPL28-203	ENST00000429738	AKR1B1	P15121	316 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	CDK8	P49336	464 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	MAP2K5	Q13163	448 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	SIAH1	Q8IUQ4	282 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	PI4K2B	Q8TCG2	481 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	APPBP2	Q92624	585 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	OSBP2	Q969R2	916 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	DDRGK1	Q96HY6	314 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	CCDC17	Q96LX7	622 aa		21.3	■■□□□ 1
MRPL28-203	ENST00000429738	RPAP3	Q9H6T3	665 aa	Predicted RBP	21.3	■■□□□ 1
MRPL28-203	ENST00000429738	GREB1L	Q9C091	1923 aa	Predicted RBP	21.29	■■□□□ 1
MRPL28-203	ENST00000429738	GLRX3	O76003	335 aa	Known RBP	21.29	■■□□□ 1
MRPL28-203	ENST00000429738	CCNA1	P78396	465 aa		21.29	■■□□□ 1
MRPL28-203	ENST00000429738	AMOTL1	Q8IY63	956 aa		21.29	■■□□□ 1
MRPL28-203	ENST00000429738	CRBN	Q96SW2	442 aa		21.29	■■□□□ 1
MRPL28-203	ENST00000429738	CWC22	Q9HCG8	908 aa	Known RBP	21.29	■■□□□ 1
MRPL28-203	ENST00000429738	SALL3	Q9BXA9	1300 aa		21.29	■■□□□ 1
MRPL28-203	ENST00000429738	PARP14	Q460N5	1801 aa		21.28	■■□□□ 1
MRPL28-203	ENST00000429738	SPDYE16	A6NNV3	312 aa	Predicted RBP	21.28	■■□□□ 1
MRPL28-203	ENST00000429738	GSG1L2	A8MUP6	293 aa		21.28	■■□□□ 1
MRPL28-203	ENST00000429738	RNF113A	O15541	343 aa	Known RBP	21.28	■■□□□ 1
MRPL28-203	ENST00000429738	ZFY	P08048	801 aa	Predicted RBP	21.28	■■□□□ 1
MRPL28-203	ENST00000429738	MDM2	Q00987	491 aa	Predicted RBP	21.28	■■□□□ 1
MRPL28-203	ENST00000429738	SBK1	Q52WX2	424 aa		21.28	■■□□□ 1
MRPL28-203	ENST00000429738	MFSD14C	Q5VZR4	134 aa		21.28	■■□□□ 1
MRPL28-203	ENST00000429738	GIMAP6	Q6P9H5	292 aa		21.28	■■□□□ 1
MRPL28-203	ENST00000429738	OTUD7A	Q8TE49	926 aa	Predicted RBP	21.28	■■□□□ 1
MRPL28-203	ENST00000429738	ARPP21	Q9UBL0	812 aa	Predicted RBP	21.28	■■□□□ 1
MRPL28-203	ENST00000429738		A0A0G2JMZ2	1700 aa		21.28	■■□□□ 1
MRPL28-203	ENST00000429738	KIAA1755	Q5JYT7	1200 aa		21.27	■■□□□ 1
MRPL28-203	ENST00000429738	BTBD7	Q9P203	1132 aa		21.27	■■□□□ 1
MRPL28-203	ENST00000429738	TMX2	Q9Y320	296 aa		21.27	■■□□□ 1
MRPL28-203	ENST00000429738	SLC15A5	A6NIM6	579 aa		21.26	■□□□□ 0.99
MRPL28-203	ENST00000429738	ERC2	O15083	957 aa		21.26	■□□□□ 0.99
MRPL28-203	ENST00000429738	ICA1	Q05084	483 aa		21.26	■□□□□ 0.99
MRPL28-203	ENST00000429738	CLEC10A	Q8IUN9	316 aa		21.26	■□□□□ 0.99
MRPL28-203	ENST00000429738	LPAR1	Q92633	364 aa		21.26	■□□□□ 0.99
MRPL28-203	ENST00000429738	ARHGEF10L	Q9HCE6	1279 aa		21.26	■□□□□ 0.99
MRPL28-203	ENST00000429738	ROBO3	Q96MS0	1386 aa		21.25	■□□□□ 0.99
MRPL28-203	ENST00000429738	GPAA1	O43292	621 aa		21.25	■□□□□ 0.99
MRPL28-203	ENST00000429738	PTPRE	P23469	700 aa		21.25	■□□□□ 0.99
MRPL28-203	ENST00000429738	COG2	Q14746	738 aa		21.25	■□□□□ 0.99
MRPL28-203	ENST00000429738	SENP6	Q9GZR1	1112 aa	Predicted RBP	21.25	■□□□□ 0.99
MRPL28-203	ENST00000429738	FLRT1	Q9NZU1	646 aa		21.25	■□□□□ 0.99
MRPL28-203	ENST00000429738	POTEB2	H3BUK9	544 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738		M0R2C6	588 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	MSC	O60682	206 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	HOXC6	P09630	235 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	MX1	P20591	662 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	HDAC1	Q13547	482 aa	Predicted RBP	21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	WDR78	Q5VTH9	848 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	FAM109B	Q6ICB4	259 aa	Predicted RBP	21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	LBHD1	Q9BQE6	289 aa	Predicted RBP	21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	SH2D4A	Q9H788	454 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	VCPKMT	Q9H867	229 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	DDX20	Q9UHI6	824 aa	Known RBP	21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	DNAH12	Q6ZR08	3092 aa		21.24	■□□□□ 0.99
MRPL28-203	ENST00000429738	GNAT2	P19087	354 aa		21.23	■□□□□ 0.99
MRPL28-203	ENST00000429738	ATP2B2	Q01814	1243 aa		21.23	■□□□□ 0.99
MRPL28-203	ENST00000429738	LRRFIP1	Q32MZ4	808 aa	Known RBP	21.23	■□□□□ 0.99
MRPL28-203	ENST00000429738	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	21.23	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms