RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 MKNK2Q9HBH9 465 aa12.18□□□□□ -0.46
COMMD1-202ENST00000427417 MYH8P13535 1937 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 GSG1L2A8MUP6 293 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 PATL2C9JE40 543 aaKnown RBP12.17□□□□□ -0.46
COMMD1-202ENST00000427417 APPP05067 770 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 CYP2B6P20813 491 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 RGS2P41220 211 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 TDO2P48775 406 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 GPR142Q7Z601 462 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 DEFB118Q96PH6 123 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 HMX1Q9NP08 348 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-202ENST00000427417 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-202ENST00000427417 TMX2Q9Y320 296 aa12.17□□□□□ -0.46
COMMD1-202ENST00000427417 RPTORQ8N122 1335 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 TFRCP02786 760 aaKnown RBP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 MB21D1Q8N884 522 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 OTUD7AQ8TE49 926 aaPredicted RBP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 TRIB2Q92519 343 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 HTATIP2Q9BUP3 242 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
COMMD1-202ENST00000427417 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 IVNS1ABPQ9Y6Y0 642 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 ROBO3Q96MS0 1386 aa12.16□□□□□ -0.46
COMMD1-202ENST00000427417 SALL3Q9BXA9 1300 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 H0YGN5 161 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 M0R2C6 588 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 CNMDO75829 334 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 FARP2O94887 1054 aaPredicted RBP12.15□□□□□ -0.46
COMMD1-202ENST00000427417 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
COMMD1-202ENST00000427417 EEF2P13639 858 aaKnown RBP12.15□□□□□ -0.46
COMMD1-202ENST00000427417 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 MORN1Q5T089 497 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 WDR78Q5VTH9 848 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 SIAH1Q8IUQ4 282 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 IFNL3Q8IZI9 196 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 USP6NLQ92738 828 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 DPF3Q92784 378 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 APBA2Q99767 749 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 BTBD7Q9P203 1132 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 STAP2Q9UGK3 403 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 CEP290O15078 2479 aa12.15□□□□□ -0.46
COMMD1-202ENST00000427417 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 FLOT1O75955 427 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 PTPREP23469 700 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 DSG3P32926 999 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 PDE1AP54750 535 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 CCL14Q16627 93 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 HABP4Q5JVS0 413 aaKnown RBP12.14□□□□□ -0.47
COMMD1-202ENST00000427417 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
COMMD1-202ENST00000427417 SPICE1Q8N0Z3 855 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
COMMD1-202ENST00000427417 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 NAPBQ9H115 298 aa12.14□□□□□ -0.47
COMMD1-202ENST00000427417 EPB41L4AQ9HCS5 686 aaPredicted RBP12.14□□□□□ -0.47
COMMD1-202ENST00000427417 ALPK3Q96L96 1907 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 STRNO43815 780 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
COMMD1-202ENST00000427417 RASA1P20936 1047 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 PDE4BQ07343 736 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 GRB14Q14449 540 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 MAP3K21Q5TCX8 1036 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 SEC62Q99442 399 aaKnown RBP12.13□□□□□ -0.47
COMMD1-202ENST00000427417 SPATC1LQ9H0A9 340 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 MROH8Q9H579 483 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
COMMD1-202ENST00000427417 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
COMMD1-202ENST00000427417 RAD21O60216 631 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 PLS1Q14651 629 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
COMMD1-202ENST00000427417 NECAB2Q7Z6G3 386 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
COMMD1-202ENST00000427417 MOV10L1Q9BXT6 1211 aaKnown RBP12.12□□□□□ -0.47
COMMD1-202ENST00000427417 LNPKQ9C0E8 428 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 SYNPO2Q9UMS6 1093 aa12.12□□□□□ -0.47
COMMD1-202ENST00000427417 RLFQ13129 1914 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 SLC25A27O95847 323 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 HOXC6P09630 235 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 CACNB2Q08289 660 aaPredicted RBP12.11□□□□□ -0.47
COMMD1-202ENST00000427417 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
COMMD1-202ENST00000427417 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms