RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 VCAM1P19320 739 aa25.84■■□□□ 1.73
HMGA2-205ENST00000425208 MKL1Q969V6 931 aa25.84■■□□□ 1.73
HMGA2-205ENST00000425208 ZSWIM5Q9P217 1185 aa25.84■■□□□ 1.73
HMGA2-205ENST00000425208 PNMA3Q9UL41 463 aa25.84■■□□□ 1.73
HMGA2-205ENST00000425208 CCDC178Q5BJE1 867 aa25.83■■□□□ 1.73
HMGA2-205ENST00000425208 LRRC47Q8N1G4 583 aaKnown RBP25.83■■□□□ 1.73
HMGA2-205ENST00000425208 PARK7Q99497 189 aaKnown RBP25.83■■□□□ 1.73
HMGA2-205ENST00000425208 CFHR5Q9BXR6 569 aa25.83■■□□□ 1.73
HMGA2-205ENST00000425208 RAD21O60216 631 aa25.82■■□□□ 1.72
HMGA2-205ENST00000425208 HSPA4P34932 840 aa25.82■■□□□ 1.72
HMGA2-205ENST00000425208 ZKSCAN3Q9BRR0 538 aa25.82■■□□□ 1.72
HMGA2-205ENST00000425208 UBAC1Q9BSL1 405 aa25.82■■□□□ 1.72
HMGA2-205ENST00000425208 ZFYVE28Q9HCC9 887 aa25.82■■□□□ 1.72
HMGA2-205ENST00000425208 NOVP48745 357 aa25.81■■□□□ 1.72
HMGA2-205ENST00000425208 CRHR2Q13324 411 aa25.81■■□□□ 1.72
HMGA2-205ENST00000425208 SPICE1Q8N0Z3 855 aa25.81■■□□□ 1.72
HMGA2-205ENST00000425208 TTC14Q96N46 770 aa25.81■■□□□ 1.72
HMGA2-205ENST00000425208 ZSCAN10Q96SZ4 725 aaPredicted RBP25.81■■□□□ 1.72
HMGA2-205ENST00000425208 USP26Q9BXU7 913 aa25.81■■□□□ 1.72
HMGA2-205ENST00000425208 TBC1D8O95759 1140 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 MCCP23508 829 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 HOXA7P31268 230 aaPredicted RBP25.8■■□□□ 1.72
HMGA2-205ENST00000425208 KRT32Q14532 448 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 TSGA10IPQ3SY00 556 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 C8orf34Q49A92 452 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 F5H6K3 240 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 FOXN1O15353 648 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 OSBPP22059 807 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 IRX3P78415 501 aaPredicted RBP25.8■■□□□ 1.72
HMGA2-205ENST00000425208 KLRC3Q07444 240 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 KIAA1755Q5JYT7 1200 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 CYB5R4Q7L1T6 521 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 DGKHQ86XP1 1220 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 MB21D2Q8IYB1 491 aaPredicted RBP25.8■■□□□ 1.72
HMGA2-205ENST00000425208 RASEFQ8IZ41 740 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 GMCL1P1Q8NEA9 526 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 RPAP3Q9H6T3 665 aaPredicted RBP25.8■■□□□ 1.72
HMGA2-205ENST00000425208 TSKSQ9UJT2 592 aa25.8■■□□□ 1.72
HMGA2-205ENST00000425208 TNKSO95271 1327 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L15C9J2P7 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L13C9JLJ4 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L11C9JVI0 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L18D6R9N7 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L22D6RA61 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L17D6RBQ6 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L19D6RCP7 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L20D6RJB6 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 WDR46O15213 610 aaKnown RBP25.79■■□□□ 1.72
HMGA2-205ENST00000425208 CYP2C8P10632 490 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 TOP1P11387 765 aaKnown RBP25.79■■□□□ 1.72
HMGA2-205ENST00000425208 USP17L24Q0WX57 530 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 SMCR8Q8TEV9 937 aaPredicted RBP25.79■■□□□ 1.72
HMGA2-205ENST00000425208 KCNB2Q92953 911 aa25.79■■□□□ 1.72
HMGA2-205ENST00000425208 NDUFB10O96000 172 aa25.78■■□□□ 1.72
HMGA2-205ENST00000425208 SART3Q15020 963 aaKnown RBP25.78■■□□□ 1.72
HMGA2-205ENST00000425208 RCSD1Q6JBY9 416 aa25.78■■□□□ 1.72
HMGA2-205ENST00000425208 TMEM47Q9BQJ4 181 aa25.78■■□□□ 1.72
HMGA2-205ENST00000425208 TANGO6Q9C0B7 1094 aa25.78■■□□□ 1.72
HMGA2-205ENST00000425208 ASCC2Q9H1I8 757 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-205ENST00000425208 ERICH2A1L162 156 aa25.77■■□□□ 1.72
HMGA2-205ENST00000425208 TLR2O60603 784 aa25.77■■□□□ 1.72
HMGA2-205ENST00000425208 MCM5P33992 734 aa25.77■■□□□ 1.72
HMGA2-205ENST00000425208 CTCFP49711 727 aaPredicted RBP25.77■■□□□ 1.72
HMGA2-205ENST00000425208 ENAHQ8N8S7 591 aaPredicted RBP25.77■■□□□ 1.72
HMGA2-205ENST00000425208 CATSPERGQ6ZRH7 1159 aa25.76■■□□□ 1.71
HMGA2-205ENST00000425208 NEK1Q96PY6 1258 aa25.76■■□□□ 1.71
HMGA2-205ENST00000425208 R3HDMLQ9H3Y0 253 aa25.76■■□□□ 1.71
HMGA2-205ENST00000425208 SNX14Q9Y5W7 946 aa25.76■■□□□ 1.71
HMGA2-205ENST00000425208 IFIT3O14879 490 aaKnown RBP25.75■■□□□ 1.71
HMGA2-205ENST00000425208 FAM83BQ5T0W9 1011 aa25.75■■□□□ 1.71
HMGA2-205ENST00000425208 IFIT1BQ5T764 474 aaKnown RBP25.75■■□□□ 1.71
HMGA2-205ENST00000425208 SLFN13Q68D06 897 aa25.75■■□□□ 1.71
HMGA2-205ENST00000425208 CHST3Q7LGC8 479 aa25.75■■□□□ 1.71
HMGA2-205ENST00000425208 KAT14Q9H8E8 782 aa25.75■■□□□ 1.71
HMGA2-205ENST00000425208 HSPA8P11142 646 aaKnown RBP25.74■■□□□ 1.71
HMGA2-205ENST00000425208 ANTXR2P58335 489 aa25.74■■□□□ 1.71
HMGA2-205ENST00000425208 ADCK5Q3MIX3 580 aa25.74■■□□□ 1.71
HMGA2-205ENST00000425208 ANKS1AQ92625 1134 aa25.74■■□□□ 1.71
HMGA2-205ENST00000425208 GMCL1Q96IK5 515 aa25.74■■□□□ 1.71
HMGA2-205ENST00000425208 MTA3Q9BTC8 594 aa25.74■■□□□ 1.71
HMGA2-205ENST00000425208 PARP14Q460N5 1801 aa25.74■■□□□ 1.71
HMGA2-205ENST00000425208 ADGRA2Q96PE1 1338 aa25.73■■□□□ 1.71
HMGA2-205ENST00000425208 PRC1O43663 620 aa25.73■■□□□ 1.71
HMGA2-205ENST00000425208 SEC24BO95487 1268 aa25.73■■□□□ 1.71
HMGA2-205ENST00000425208 HMGB1P09429 215 aaKnown RBP25.73■■□□□ 1.71
HMGA2-205ENST00000425208 SLC1A4P43007 532 aa25.73■■□□□ 1.71
HMGA2-205ENST00000425208 SEC23AQ15436 765 aa25.73■■□□□ 1.71
HMGA2-205ENST00000425208 NOM1Q5C9Z4 860 aaKnown RBP25.73■■□□□ 1.71
HMGA2-205ENST00000425208 GPR25O00155 361 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 FLOT1O75955 427 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 BMP3P12645 472 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 GCLCP48506 637 aaPredicted RBP25.72■■□□□ 1.71
HMGA2-205ENST00000425208 HERVK_113P62684 666 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 WTAPQ15007 396 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 TMEM67Q5HYA8 995 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 PNMA1Q8ND90 353 aa25.72■■□□□ 1.71
HMGA2-205ENST00000425208 GTF3C2Q8WUA4 911 aaPredicted RBP25.72■■□□□ 1.71
HMGA2-205ENST00000425208 JAKMIP1Q96N16 626 aaKnown RBP25.72■■□□□ 1.71
HMGA2-205ENST00000425208 NUP88Q99567 741 aaPredicted RBP25.72■■□□□ 1.71
HMGA2-205ENST00000425208 P2RX7Q99572 595 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms