RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PPP1R13LQ8WUF5 828 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 POLR3GLQ9BT43 218 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 PRR36Q9H6K5 1346 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 DNAJC25-GNG10A0A024R161 153 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 A0A0U1RQG5 324 aaPredicted RBP4.05□□□□□ -1.76
PMS1-209ENST00000424059 KRT1P04264 644 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 C1QTNF9P0C862 333 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 PLCG1P19174 1290 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 CHRNEQ04844 493 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 DUSP4Q13115 394 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 PSMD2Q13200 908 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 MAP3K11Q16584 847 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 TMC4Q7Z404 712 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 SPPL2CQ8IUH8 684 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 SLFN12Q8IYM2 578 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 DTWD2Q8NBA8 298 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 NAP1L5Q96NT1 182 aaPredicted RBP4.05□□□□□ -1.76
PMS1-209ENST00000424059 DIRC2Q96SL1 478 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 CWC22Q9HCG8 908 aaKnown RBP4.05□□□□□ -1.76
PMS1-209ENST00000424059 USP31Q70CQ4 1352 aa4.05□□□□□ -1.76
PMS1-209ENST00000424059 RBM47A0AV96 593 aaKnown RBP4.04□□□□□ -1.76
PMS1-209ENST00000424059 ANKRD33BA6NCL7 494 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 PEX10O60683 326 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 SNX17Q15036 470 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 RALGPS1Q5JS13 557 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 CRELD1Q96HD1 420 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 DPH2Q9BQC3 489 aaPredicted RBP4.04□□□□□ -1.76
PMS1-209ENST00000424059 SEMA7AO75326 666 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 HK2P52789 917 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 EGR3Q06889 387 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 KCNA10Q16322 511 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 MEI1Q5TIA1 1274 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 CIAPIN1Q6FI81 312 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 ANKS4BQ8N8V4 417 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 ENOX1Q8TC92 643 aaKnown RBP4.04□□□□□ -1.76
PMS1-209ENST00000424059 GATAD2BQ8WXI9 593 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 RSRP1Q9BUV0 290 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 PARP2Q9UGN5 583 aa4.04□□□□□ -1.76
PMS1-209ENST00000424059 FAM221AA4D161 298 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 ZGLP1P0C6A0 271 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 ZSCAN22P10073 491 aaPredicted RBP4.03□□□□□ -1.76
PMS1-209ENST00000424059 LTKP29376 864 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 RNF4P78317 190 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 XPCQ01831 940 aaPredicted RBP4.03□□□□□ -1.76
PMS1-209ENST00000424059 LCNL1Q6ZST4 164 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 ADAMTS10Q9H324 1103 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 SP110Q9HB58 689 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 CLSPNQ9HAW4 1339 aa4.03□□□□□ -1.76
PMS1-209ENST00000424059 NPIPB6E9PJ23 425 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 ERCC3P19447 782 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 CAMK2GQ13555 558 aaPredicted RBP4.02□□□□□ -1.77
PMS1-209ENST00000424059 MLECQ14165 292 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 MPP2Q14168 576 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 ATG14Q6ZNE5 492 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 TTLL10Q6ZVT0 673 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 RELL1Q8IUW5 271 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 JARID2Q92833 1246 aaPredicted RBP4.02□□□□□ -1.77
PMS1-209ENST00000424059 RHOVQ96L33 236 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 CCDC74BQ96LY2 380 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 KREMEN1Q96MU8 473 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 RNF32Q9H0A6 362 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 HRKO00198 91 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 TMEM74Q96NL1 305 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 TLR6Q9Y2C9 796 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 YBX2Q9Y2T7 364 aaKnown RBP4.02□□□□□ -1.77
PMS1-209ENST00000424059 PCDHA11Q9Y5I1 949 aa4.02□□□□□ -1.77
PMS1-209ENST00000424059 ROBO2Q9HCK4 1378 aa4.01□□□□□ -1.77
PMS1-209ENST00000424059 TNNI2P48788 182 aa4.01□□□□□ -1.77
PMS1-209ENST00000424059 CHMP4BP1P59074 171 aa4.01□□□□□ -1.77
PMS1-209ENST00000424059 BNC2Q6ZN30 1099 aaPredicted RBP4.01□□□□□ -1.77
PMS1-209ENST00000424059 RNF111Q6ZNA4 994 aa4.01□□□□□ -1.77
PMS1-209ENST00000424059 ASCC2Q9H1I8 757 aaPredicted RBP4.01□□□□□ -1.77
PMS1-209ENST00000424059 REV1Q9UBZ9 1251 aa4.01□□□□□ -1.77
PMS1-209ENST00000424059 SMG5Q9UPR3 1016 aaKnown RBP4.01□□□□□ -1.77
PMS1-209ENST00000424059 ETV2O00321 342 aaPredicted RBP4□□□□□ -1.77
PMS1-209ENST00000424059 PF4P02776 101 aa4□□□□□ -1.77
PMS1-209ENST00000424059 CTSHP09668 335 aa4□□□□□ -1.77
PMS1-209ENST00000424059 ENDOUP21128 410 aaKnown RBP4□□□□□ -1.77
PMS1-209ENST00000424059 ERVFC1P60507 584 aa4□□□□□ -1.77
PMS1-209ENST00000424059 TEKQ02763 1124 aa4□□□□□ -1.77
PMS1-209ENST00000424059 CLEC16AQ2KHT3 1053 aa4□□□□□ -1.77
PMS1-209ENST00000424059 SYTL5Q8TDW5 730 aaPredicted RBP4□□□□□ -1.77
PMS1-209ENST00000424059 INTS4Q96HW7 963 aaKnown RBP4□□□□□ -1.77
PMS1-209ENST00000424059 LRRC3Q9BY71 257 aa4□□□□□ -1.77
PMS1-209ENST00000424059 ZNF281Q9Y2X9 895 aa4□□□□□ -1.77
PMS1-209ENST00000424059 CORINQ9Y5Q5 1042 aa4□□□□□ -1.77
PMS1-209ENST00000424059 TEX51A0A1B0GUA7 166 aa4□□□□□ -1.77
PMS1-209ENST00000424059 SORBS3O60504 671 aa4□□□□□ -1.77
PMS1-209ENST00000424059 HTR3BO95264 441 aa4□□□□□ -1.77
PMS1-209ENST00000424059 F13A1P00488 732 aa4□□□□□ -1.77
PMS1-209ENST00000424059 LINC00310P59036 64 aa4□□□□□ -1.77
PMS1-209ENST00000424059 RAD51AP2Q09MP3 1159 aa4□□□□□ -1.77
PMS1-209ENST00000424059 SNAP47Q5SQN1 464 aa4□□□□□ -1.77
PMS1-209ENST00000424059 DNAJC14Q6Y2X3 702 aaPredicted RBP4□□□□□ -1.77
PMS1-209ENST00000424059 FBXO33Q7Z6M2 555 aa4□□□□□ -1.77
PMS1-209ENST00000424059 KCNN1Q92952 543 aa4□□□□□ -1.77
PMS1-209ENST00000424059 ZNF552Q9H707 407 aaPredicted RBP4□□□□□ -1.77
PMS1-209ENST00000424059 UPK3BL1B0FP48 263 aa3.99□□□□□ -1.77
PMS1-209ENST00000424059 UPK3BL2E5RIL1 263 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms