RNA–Protein interactions for RNA: ENST00000419744.1

ATRAID-203, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-203ENST00000419744 MYLIPQ8WY64 445 aa9.65□□□□□ -0.86
ATRAID-203ENST00000419744 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
ATRAID-203ENST00000419744 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
ATRAID-203ENST00000419744 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
ATRAID-203ENST00000419744 RAPGEFL1Q9UHV5 662 aa9.65□□□□□ -0.86
ATRAID-203ENST00000419744 SIPA1L1O43166 1804 aa9.65□□□□□ -0.86
ATRAID-203ENST00000419744 IL16Q14005 1332 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 SALL1Q9NSC2 1324 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
ATRAID-203ENST00000419744 VAMP4O75379 141 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 PLA2G5P39877 138 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 CACNB2Q08289 660 aaPredicted RBP9.64□□□□□ -0.87
ATRAID-203ENST00000419744 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
ATRAID-203ENST00000419744 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 RETREG3Q86VR2 466 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 ANKRD44Q8N8A2 993 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 SOCS4Q8WXH5 440 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 USP6NLQ92738 828 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 DDX4Q9NQI0 724 aaKnown RBP9.64□□□□□ -0.87
ATRAID-203ENST00000419744 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 GTF3C3Q9Y5Q9 886 aa9.64□□□□□ -0.87
ATRAID-203ENST00000419744 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
ATRAID-203ENST00000419744 NBPF7P0C2Y1 421 aaPredicted RBP9.63□□□□□ -0.87
ATRAID-203ENST00000419744 CCND3P30281 292 aaPredicted RBP9.63□□□□□ -0.87
ATRAID-203ENST00000419744 RFC5P40937 340 aa9.63□□□□□ -0.87
ATRAID-203ENST00000419744 C9orf50Q5SZB4 431 aa9.63□□□□□ -0.87
ATRAID-203ENST00000419744 WWC1Q8IX03 1113 aa9.63□□□□□ -0.87
ATRAID-203ENST00000419744 USP38Q8NB14 1042 aa9.63□□□□□ -0.87
ATRAID-203ENST00000419744 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
ATRAID-203ENST00000419744 ASCC2Q9H1I8 757 aaPredicted RBP9.63□□□□□ -0.87
ATRAID-203ENST00000419744 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
ATRAID-203ENST00000419744 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
ATRAID-203ENST00000419744 REV3LO60673 3130 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 IFIT1P09914 478 aaKnown RBP9.62□□□□□ -0.87
ATRAID-203ENST00000419744 FOSL2P15408 326 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 CYP2B6P20813 491 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 SMAD3P84022 425 aaKnown RBP9.62□□□□□ -0.87
ATRAID-203ENST00000419744 KCNC4Q03721 635 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 SHHQ15465 462 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 KLHDC4Q8TBB5 520 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 SPSB2Q99619 263 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
ATRAID-203ENST00000419744 TXNRD2Q9NNW7 524 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 PLSCR2Q9NRY7 297 aa9.62□□□□□ -0.87
ATRAID-203ENST00000419744 C9orf78Q9NZ63 289 aaPredicted RBP9.62□□□□□ -0.87
ATRAID-203ENST00000419744 CHD9Q3L8U1 2897 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 TMEM265A0A087WTH1 108 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 PEX10O60683 326 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 ADH1BP00325 375 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 ZKSCAN1P17029 563 aaPredicted RBP9.61□□□□□ -0.87
ATRAID-203ENST00000419744 HMGCS2P54868 508 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 SPP2Q13103 211 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 PABPC4Q13310 644 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATRAID-203ENST00000419744 CCL14Q16627 93 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 TRMT44Q8IYL2 757 aaKnown RBP9.61□□□□□ -0.87
ATRAID-203ENST00000419744 ZNF280CQ8ND82 737 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 APBA2Q99767 749 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 LBHD1Q9BQE6 289 aaPredicted RBP9.61□□□□□ -0.87
ATRAID-203ENST00000419744 NUDT12Q9BQG2 462 aa9.61□□□□□ -0.87
ATRAID-203ENST00000419744 OSBPL5Q9H0X9 879 aaPredicted RBP9.61□□□□□ -0.87
ATRAID-203ENST00000419744 CHD7Q9P2D1 2997 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 TLL1O43897 1013 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 LDHBP07195 334 aaKnown RBP9.6□□□□□ -0.87
ATRAID-203ENST00000419744 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
ATRAID-203ENST00000419744 RRP1BQ14684 758 aaKnown RBP9.6□□□□□ -0.87
ATRAID-203ENST00000419744 TMEM259Q4ZIN3 620 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 LPIN2Q92539 896 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 SRCIN1Q9C0H9 1055 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 PRKRIP1Q9H875 184 aaPredicted RBP9.6□□□□□ -0.87
ATRAID-203ENST00000419744 ZNF236Q9UL36 1845 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 NCOR1O75376 2440 aa9.6□□□□□ -0.87
ATRAID-203ENST00000419744 CFAP99D6REC4 459 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 DNM1LO00429 736 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 IGHA2P01877 340 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 SLC5A1P13866 664 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 HOXA7P31268 230 aaPredicted RBP9.59□□□□□ -0.87
ATRAID-203ENST00000419744 RHBDL3P58872 404 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 RTP1P59025 263 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 HERVK_113P62684 666 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 SNX17Q15036 470 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 MSS51Q4VC12 460 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 GPR142Q7Z601 462 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 SENP6Q9GZR1 1112 aaPredicted RBP9.59□□□□□ -0.87
ATRAID-203ENST00000419744 PORCNQ9H237 461 aa9.59□□□□□ -0.87
ATRAID-203ENST00000419744 MAPK4P31152 587 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
ATRAID-203ENST00000419744 CAP2P40123 477 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 RGS2P41220 211 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 BTDP43251 543 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 ERVK-24P63145 666 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 EXOSC9Q06265 439 aaKnown RBP9.58□□□□□ -0.88
ATRAID-203ENST00000419744 PICALMQ13492 652 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 ATG9AQ7Z3C6 839 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
ATRAID-203ENST00000419744 GPRC5AQ8NFJ5 357 aa9.58□□□□□ -0.88
ATRAID-203ENST00000419744 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms