RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CNGA4Q8IV77 575 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 CCDC151A5D8V7 595 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 MCM7P33993 719 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 PKN1Q16512 942 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 SUGCTQ9HAC7 445 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 RNF216Q9NWF9 866 aaPredicted RBP17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 ROBO1Q9Y6N7 1651 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 PPP1R3GB7ZBB8 358 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 TXLNBQ8N3L3 684 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 CEP112Q8N8E3 955 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 ZSCAN10Q96SZ4 725 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 SLF1Q9BQI6 1058 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 RTL9Q8NET4 1388 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 KRT31Q15323 416 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
SEMA3B-203ENST00000419007 H3BQF6 201 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 DYNLL1P63167 89 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 SLC4A8Q2Y0W8 1093 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 CDKAL1Q5VV42 579 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 IQCA1Q86XH1 822 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 RASSF8Q8NHQ8 419 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 FERMT2Q96AC1 680 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 PNKPQ96T60 521 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 PHF20Q9BVI0 1012 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 GYG1P46976 350 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 SEC23AQ15436 765 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 VPS18Q9P253 973 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 WTIPA6NIX2 430 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 BRD3Q15059 726 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 ANKRD20A12PQ8NF67 263 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 C8orf37Q96NL8 207 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 ANKZF1Q9H8Y5 726 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 ADAM21Q9UKJ8 722 aa17.16■□□□□ 0.34
SEMA3B-203ENST00000419007 KRT9P35527 623 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 NLRP5P59047 1200 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 RASGRP2Q7LDG7 609 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 RNF225M0QZC1 329 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 PHACTR2O75167 634 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 CHRNDQ07001 517 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 AK7Q96M32 723 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 ERVK-24P63145 666 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 NAPGQ99747 312 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 UBXN6Q9BZV1 441 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 GUCA1BQ9UMX6 200 aa17.15■□□□□ 0.34
SEMA3B-203ENST00000419007 CHD4Q14839 1912 aa17.14■□□□□ 0.34
SEMA3B-203ENST00000419007 CTAGE15A4D2H0 777 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 NMT2O60551 498 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 ERLIN1O75477 346 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 CTAGE8P0CG41 777 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 PBX1P40424 430 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 SH3RF1Q7Z6J0 888 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 CTAGE6Q86UF2 777 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 CTAGE4Q8IX94 777 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 ZNF34Q8IZ26 560 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 ABCB6Q9NP58 842 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 TTF2Q9UNY4 1162 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 XDHP47989 1333 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 UBXN1Q04323 297 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 ZSCAN26Q16670 478 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 NELFBQ8WX92 580 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 ABHD10Q9NUJ1 306 aa17.14■□□□□ 0.33
SEMA3B-203ENST00000419007 PRPF3O43395 683 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 PAK1Q13153 545 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 TMTC1Q8IUR5 882 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 CCDC102AQ96A19 550 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 EEF2KMTQ96G04 330 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 NID2Q14112 1375 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 BMP15O95972 392 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 COPB1P53618 953 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 EVX2Q03828 476 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 HDXQ7Z353 690 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 CTCFLQ8NI51 663 aaPredicted RBP17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 TRIM10Q9UDY6 481 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 PLIN2Q99541 437 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 CHP1Q99653 195 aa17.13■□□□□ 0.33
SEMA3B-203ENST00000419007 LRP6O75581 1613 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 ENC1O14682 589 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 IL6STP40189 918 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 VSNL1P62760 191 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 BEND6Q5SZJ8 279 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 CYP26C1Q6V0L0 522 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 322.6 ms