RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 DDR1Q08345 913 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 RBL2Q08999 1139 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 OCLNQ16625 522 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 CAVIN1Q6NZI2 390 aaKnown RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 CNTROBQ8N137 903 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 RBM17Q96I25 401 aaKnown RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 CCSER2Q9H7U1 834 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 JADE2Q9NQC1 790 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 CLIP2Q9UDT6 1046 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 CBFA2T2O43439 604 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 SLC7A5Q01650 507 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 ARMC3Q5W041 872 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 KIAA1328Q86T90 577 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 C16orf71Q8IYS4 520 aaPredicted RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 CLASRPQ8N2M8 674 aaKnown RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 CCDC112Q8NEF3 446 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 ALDH8A1Q9H2A2 487 aaPredicted RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 ECHDC1Q9NTX5 307 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 SLC27A2O14975 620 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 SURF6O75683 361 aaKnown RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 S100BP04271 92 aaPredicted RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 MIPOL1Q8TD10 442 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 RUFY2Q8WXA3 655 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 EZH1Q92800 747 aaPredicted RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 SUCLG2Q96I99 432 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 EXOC6BQ9Y2D4 811 aa10.08□□□□□ -0.8
SP140-204ENST00000417495 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
SP140-204ENST00000417495 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 ERVV-1B6SEH8 477 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 EVI5O60447 810 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 E2F6O75461 281 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 RASA1P20936 1047 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 GCKP35557 465 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 CDR1P51861 262 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 CLDN10P78369 228 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 ENOX2Q16206 610 aaKnown RBP10.07□□□□□ -0.8
SP140-204ENST00000417495 FBXO38Q6PIJ6 1188 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 CCDC80Q76M96 950 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 FHOD1Q9Y613 1164 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 ICMTO60725 284 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 KCNA2P16389 499 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 GPTP24298 496 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 HNRNPH1P31943 449 aaKnown RBP10.07□□□□□ -0.8
SP140-204ENST00000417495 ZBED6P86452 979 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 OTUD7AQ8TE49 926 aaPredicted RBP10.07□□□□□ -0.8
SP140-204ENST00000417495 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
SP140-204ENST00000417495 DHRS1Q96LJ7 313 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 TM6SF1Q9BZW5 370 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 NHSQ6T4R5 1651 aa10.07□□□□□ -0.8
SP140-204ENST00000417495 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 ST18O60284 1047 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 KRT38O76015 456 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 PLA2G4AP47712 749 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 DPYDQ12882 1025 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 PKN1Q16512 942 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 AKNAD1Q5T1N1 836 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 TMC7Q7Z402 723 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 MICALL2Q8IY33 904 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 ARL10Q8N8L6 244 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 NEK9Q8TD19 979 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 PARD3BQ8TEW8 1205 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 DDX11Q96FC9 970 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 FAM81BQ96LP2 452 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 NACA2Q9H009 215 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 USP25Q9UHP3 1055 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 BARX2Q9UMQ3 279 aaPredicted RBP10.06□□□□□ -0.8
SP140-204ENST00000417495 NUP98P52948 1817 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 CFAP99D6REC4 459 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 HARSP12081 509 aaKnown RBP10.06□□□□□ -0.8
SP140-204ENST00000417495 CD46P15529 392 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 CUL4AQ13619 759 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 CATIPQ7Z7H3 387 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 TAF4BQ92750 862 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 ATP8A1Q9Y2Q0 1164 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 USP16Q9Y5T5 823 aa10.06□□□□□ -0.8
SP140-204ENST00000417495 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 ERLIN1O75477 346 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
SP140-204ENST00000417495 HSPA4P34932 840 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 G3BP1Q13283 466 aaKnown RBP eCLIP10.05□□□□□ -0.8
SP140-204ENST00000417495 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
SP140-204ENST00000417495 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 ERO1AQ96HE7 468 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 SCN7AQ01118 1682 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 SKIP12755 728 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 ATP5JP18859 108 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 ST5P78524 1137 aa10.05□□□□□ -0.8
SP140-204ENST00000417495 PREPLQ4J6C6 727 aaPredicted RBP10.05□□□□□ -0.8
SP140-204ENST00000417495 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms