RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ARPP21Q9UBL0 812 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-208ENST00000417285 CYP2D7A0A087X1C5 515 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 SLC15A5A6NIM6 579 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 ERC2O15083 957 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 ICA1Q05084 483 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 MAP2K5Q13163 448 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 SBK1Q52WX2 424 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 NECAB2Q7Z6G3 386 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 APPBP2Q92624 585 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 CRBNQ96SW2 442 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 APBA2Q99767 749 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 TANGO6Q9C0B7 1094 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 KANSL2Q9H9L4 492 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 BTBD7Q9P203 1132 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 IVNS1ABPQ9Y6Y0 642 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 TTC41PQ6P2S7 1318 aa30.38■■■□□ 2.45
VEGFA-208ENST00000417285 PRKAR2AP13861 404 aaKnown RBP30.37■■■□□ 2.45
VEGFA-208ENST00000417285 PTPREP23469 700 aa30.37■■■□□ 2.45
VEGFA-208ENST00000417285 GNAT2P19087 354 aa30.36■■■□□ 2.45
VEGFA-208ENST00000417285 WDR78Q5VTH9 848 aa30.36■■■□□ 2.45
VEGFA-208ENST00000417285 MB21D1Q8N884 522 aa30.36■■■□□ 2.45
VEGFA-208ENST00000417285 VCPKMTQ9H867 229 aa30.36■■■□□ 2.45
VEGFA-208ENST00000417285 COLQQ9Y215 455 aaPredicted RBP30.36■■■□□ 2.45
VEGFA-208ENST00000417285 GSG1L2A8MUP6 293 aa30.35■■■□□ 2.45
VEGFA-208ENST00000417285 TSHZ3Q63HK5 1081 aa30.35■■■□□ 2.45
VEGFA-208ENST00000417285 OSBP2Q969R2 916 aa30.35■■■□□ 2.45
VEGFA-208ENST00000417285 PAWRQ96IZ0 340 aaKnown RBP30.35■■■□□ 2.45
VEGFA-208ENST00000417285 MYH7P12883 1935 aa30.35■■■□□ 2.45
VEGFA-208ENST00000417285 STRNO43815 780 aa30.34■■■□□ 2.45
VEGFA-208ENST00000417285 CACNB2Q08289 660 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-208ENST00000417285 OGDHLQ9ULD0 1010 aa30.34■■■□□ 2.45
VEGFA-208ENST00000417285 SMIM22K7EJ46 135 aa30.33■■■□□ 2.45
VEGFA-208ENST00000417285 EVI5O60447 810 aa30.33■■■□□ 2.45
VEGFA-208ENST00000417285 DSG3P32926 999 aa30.33■■■□□ 2.45
VEGFA-208ENST00000417285 KIAA1755Q5JYT7 1200 aa30.33■■■□□ 2.45
VEGFA-208ENST00000417285 PCDH10Q9P2E7 1040 aa30.33■■■□□ 2.45
VEGFA-208ENST00000417285 ZBTB47Q9UFB7 747 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-208ENST00000417285 WDR46O15213 610 aaKnown RBP30.32■■■□□ 2.44
VEGFA-208ENST00000417285 HOXC6P09630 235 aa30.32■■■□□ 2.44
VEGFA-208ENST00000417285 EEF2P13639 858 aaKnown RBP30.32■■■□□ 2.44
VEGFA-208ENST00000417285 CCL14Q16627 93 aa30.32■■■□□ 2.44
VEGFA-208ENST00000417285 MFSD14CQ5VZR4 134 aa30.32■■■□□ 2.44
VEGFA-208ENST00000417285 SHCBP1Q8NEM2 672 aa30.32■■■□□ 2.44
VEGFA-208ENST00000417285 NBPF3Q9H094 633 aa30.32■■■□□ 2.44
VEGFA-208ENST00000417285 PLXNB2O15031 1838 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 FLOT1O75955 427 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 GRB14Q14449 540 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 SPICE1Q8N0Z3 855 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 MOV10L1Q9BXT6 1211 aaKnown RBP30.31■■■□□ 2.44
VEGFA-208ENST00000417285 SPATC1LQ9H0A9 340 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 MKNK2Q9HBH9 465 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 ZNF287Q9HBT7 754 aa30.31■■■□□ 2.44
VEGFA-208ENST00000417285 GPAA1O43292 621 aa30.3■■■□□ 2.44
VEGFA-208ENST00000417285 ATP2B2Q01814 1243 aa30.3■■■□□ 2.44
VEGFA-208ENST00000417285 CLEC10AQ8IUN9 316 aa30.3■■■□□ 2.44
VEGFA-208ENST00000417285 GOPCQ9HD26 462 aa30.3■■■□□ 2.44
VEGFA-208ENST00000417285 MINDY4BA8MYZ0 360 aa30.29■■■□□ 2.44
VEGFA-208ENST00000417285 PATL2C9JE40 543 aaKnown RBP30.29■■■□□ 2.44
VEGFA-208ENST00000417285 APPP05067 770 aa30.29■■■□□ 2.44
VEGFA-208ENST00000417285 PI4K2BQ8TCG2 481 aa30.29■■■□□ 2.44
VEGFA-208ENST00000417285 MROH8Q9H579 483 aa30.29■■■□□ 2.44
VEGFA-208ENST00000417285 AAMPQ13685 434 aa30.28■■■□□ 2.44
VEGFA-208ENST00000417285 DIS3LQ8TF46 1054 aaKnown RBP30.28■■■□□ 2.44
VEGFA-208ENST00000417285 BAZ2AQ9UIF9 1905 aaKnown RBP30.28■■■□□ 2.44
VEGFA-208ENST00000417285 MX1P20591 662 aa30.27■■■□□ 2.44
VEGFA-208ENST00000417285 CHRDL2Q6WN34 429 aa30.27■■■□□ 2.44
VEGFA-208ENST00000417285 DPP9Q86TI2 863 aa30.27■■■□□ 2.44
VEGFA-208ENST00000417285 NACAP1Q9BZK3 213 aa30.27■■■□□ 2.44
VEGFA-208ENST00000417285 SLC5A4Q9NY91 659 aa30.27■■■□□ 2.44
VEGFA-208ENST00000417285 ERCC3P19447 782 aa30.26■■■□□ 2.43
VEGFA-208ENST00000417285 RASA1P20936 1047 aa30.26■■■□□ 2.43
VEGFA-208ENST00000417285 TDO2P48775 406 aa30.26■■■□□ 2.43
VEGFA-208ENST00000417285 MNX1P50219 401 aaPredicted RBP30.26■■■□□ 2.43
VEGFA-208ENST00000417285 HDAC1Q13547 482 aaPredicted RBP30.26■■■□□ 2.43
VEGFA-208ENST00000417285 LHX8Q68G74 356 aa30.26■■■□□ 2.43
VEGFA-208ENST00000417285 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.26■■■□□ 2.43
VEGFA-208ENST00000417285 C11orf49Q9H6J7 331 aa30.26■■■□□ 2.43
VEGFA-208ENST00000417285 ADAMTS5Q9UNA0 930 aa30.26■■■□□ 2.43
VEGFA-208ENST00000417285 TRIOBPQ9H2D6 2365 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 CCND3P30281 292 aaPredicted RBP30.25■■■□□ 2.43
VEGFA-208ENST00000417285 PLS1Q14651 629 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 ANKRD45Q5TZF3 282 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 ZNF444Q8N0Y2 327 aaPredicted RBP30.25■■■□□ 2.43
VEGFA-208ENST00000417285 ABRAQ8N0Z2 381 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 OTUD7AQ8TE49 926 aaPredicted RBP30.25■■■□□ 2.43
VEGFA-208ENST00000417285 ATG4CQ96DT6 458 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 FSD1Q9BTV5 496 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 FLRT1Q9NZU1 646 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 NYAP2Q9P242 653 aa30.25■■■□□ 2.43
VEGFA-208ENST00000417285 M0R2C6 588 aa30.24■■■□□ 2.43
VEGFA-208ENST00000417285 SLC25A27O95847 323 aa30.24■■■□□ 2.43
VEGFA-208ENST00000417285 IFNL3Q8IZI9 196 aa30.24■■■□□ 2.43
VEGFA-208ENST00000417285 ROBO3Q96MS0 1386 aa30.24■■■□□ 2.43
VEGFA-208ENST00000417285 MSCO60682 206 aa30.23■■■□□ 2.43
VEGFA-208ENST00000417285 ADORA2AP29274 412 aa30.23■■■□□ 2.43
VEGFA-208ENST00000417285 OLFML2BQ68BL8 750 aa30.23■■■□□ 2.43
VEGFA-208ENST00000417285 NPLOC4Q8TAT6 608 aa30.23■■■□□ 2.43
VEGFA-208ENST00000417285 FXR1P51114 621 aaKnown RBP eCLIP30.22■■■□□ 2.43
VEGFA-208ENST00000417285 ZMYM1Q5SVZ6 1142 aa30.22■■■□□ 2.43
VEGFA-208ENST00000417285 NCAPG2Q86XI2 1143 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms