RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 H0YGN5 161 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 ZKSCAN1P17029 563 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 SBK1Q52WX2 424 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 TSHZ3Q63HK5 1081 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 GIMAP6Q6P9H5 292 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 SIAH1Q8IUQ4 282 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 BTBD7Q9P203 1132 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 TMX2Q9Y320 296 aa21.1■□□□□ 0.97
PDLIM2-208ENST00000416159 SLC15A5A6NIM6 579 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 SMIM22K7EJ46 135 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 MAP2K5Q13163 448 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 MAP3K21Q5TCX8 1036 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 WDR78Q5VTH9 848 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 ANKLE1Q8NAG6 615 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 OSBP2Q969R2 916 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 APBA2Q99767 749 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 TANGO6Q9C0B7 1094 aa21.09■□□□□ 0.97
PDLIM2-208ENST00000416159 GSG1L2A8MUP6 293 aa21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 PRKAR2AP13861 404 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 PTPREP23469 700 aa21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 VCPKMTQ9H867 229 aa21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 KANSL2Q9H9L4 492 aa21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 NR2E3Q9Y5X4 410 aa21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 IVNS1ABPQ9Y6Y0 642 aa21.08■□□□□ 0.97
PDLIM2-208ENST00000416159 GNAT2P19087 354 aa21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 DSG3P32926 999 aa21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 KIAA1755Q5JYT7 1200 aa21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 NECAB2Q7Z6G3 386 aa21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 CLEC10AQ8IUN9 316 aa21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 MB21D1Q8N884 522 aa21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 ZBTB47Q9UFB7 747 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-208ENST00000416159 WDR46O15213 610 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-208ENST00000416159 GPAA1O43292 621 aa21.06■□□□□ 0.96
PDLIM2-208ENST00000416159 CACNB2Q08289 660 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-208ENST00000416159 PAWRQ96IZ0 340 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-208ENST00000416159 COLQQ9Y215 455 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-208ENST00000416159 CEP290O15078 2479 aa21.06■□□□□ 0.96
PDLIM2-208ENST00000416159 EEF2P13639 858 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 ATP2B2Q01814 1243 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 CCL14Q16627 93 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 SHCBP1Q8NEM2 672 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 PI4K2BQ8TCG2 481 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 CRBNQ96SW2 442 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 MKNK2Q9HBH9 465 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 OGDHLQ9ULD0 1010 aa21.05■□□□□ 0.96
PDLIM2-208ENST00000416159 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 STRNO43815 780 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 FLOT1O75955 427 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 HOXC6P09630 235 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 MX1P20591 662 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 GRB14Q14449 540 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 MFSD14CQ5VZR4 134 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 SPICE1Q8N0Z3 855 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 MOV10L1Q9BXT6 1211 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 SPATC1LQ9H0A9 340 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 RLFQ13129 1914 aa21.04■□□□□ 0.96
PDLIM2-208ENST00000416159 PATL2C9JE40 543 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 M0R2C6 588 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 EVI5O60447 810 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 APPP05067 770 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 ANKRD45Q5TZF3 282 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 DIS3LQ8TF46 1054 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 FSD1Q9BTV5 496 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 ZNF287Q9HBT7 754 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 GOPCQ9HD26 462 aa21.03■□□□□ 0.96
PDLIM2-208ENST00000416159 RASA1P20936 1047 aa21.02■□□□□ 0.96
PDLIM2-208ENST00000416159 TDO2P48775 406 aa21.02■□□□□ 0.96
PDLIM2-208ENST00000416159 ATG4CQ96DT6 458 aa21.02■□□□□ 0.96
PDLIM2-208ENST00000416159 NBPF3Q9H094 633 aa21.02■□□□□ 0.96
PDLIM2-208ENST00000416159 ROBO3Q96MS0 1386 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 ERCC3P19447 782 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 CCND3P30281 292 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 PLS1Q14651 629 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 DPP9Q86TI2 863 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 IFNL3Q8IZI9 196 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 STK11IPQ8N1F8 1099 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 NPLOC4Q8TAT6 608 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 NACAP1Q9BZK3 213 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 MROH8Q9H579 483 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 EPB41L4AQ9HCS5 686 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 FLRT1Q9NZU1 646 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 NYAP2Q9P242 653 aa21.01■□□□□ 0.95
PDLIM2-208ENST00000416159 MNX1P50219 401 aaPredicted RBP21■□□□□ 0.95
PDLIM2-208ENST00000416159 HDAC1Q13547 482 aaPredicted RBP21■□□□□ 0.95
PDLIM2-208ENST00000416159 AAMPQ13685 434 aa21■□□□□ 0.95
PDLIM2-208ENST00000416159 ZMYM1Q5SVZ6 1142 aa21■□□□□ 0.95
PDLIM2-208ENST00000416159 SAMD1Q6SPF0 538 aaPredicted RBP21■□□□□ 0.95
PDLIM2-208ENST00000416159 CHRDL2Q6WN34 429 aa21■□□□□ 0.95
PDLIM2-208ENST00000416159 ZNF444Q8N0Y2 327 aaPredicted RBP21■□□□□ 0.95
PDLIM2-208ENST00000416159 C11orf49Q9H6J7 331 aa21■□□□□ 0.95
PDLIM2-208ENST00000416159 SLC5A4Q9NY91 659 aa21■□□□□ 0.95
PDLIM2-208ENST00000416159 ADAMTS5Q9UNA0 930 aa21■□□□□ 0.95
PDLIM2-208ENST00000416159 RAD21O60216 631 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 SLC25A27O95847 323 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 ADORA2AP29274 412 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 LHX8Q68G74 356 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 NCAPG2Q86XI2 1143 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 YTHDC1Q96MU7 727 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms