RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 NYAP2Q9P242 653 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 PNMA3Q9UL41 463 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 ZSWIM8A7E2V4 1837 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 RLFQ13129 1914 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 CYP2C8P10632 490 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 NT5C2P49902 561 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 IRX3P78415 501 aaPredicted RBP16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 NECTIN1Q15223 517 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 PPP4R3BQ5MIZ7 849 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 SPICE1Q8N0Z3 855 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 SMCR8Q8TEV9 937 aaPredicted RBP16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 ZKSCAN3Q9BRR0 538 aa16.87■□□□□ 0.29
SAPCD1-208ENST00000415669 OSBPP22059 807 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 LBX1P52954 281 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 KIAA1755Q5JYT7 1200 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 LPAR1Q92633 364 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 CFHR5Q9BXR6 569 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 TANGO6Q9C0B7 1094 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 RPAP3Q9H6T3 665 aaPredicted RBP16.86■□□□□ 0.29
SAPCD1-208ENST00000415669 UBAC1Q9BSL1 405 aa16.85■□□□□ 0.29
SAPCD1-208ENST00000415669 ASCC2Q9H1I8 757 aaPredicted RBP16.85■□□□□ 0.29
SAPCD1-208ENST00000415669 TCP11L1Q9NUJ3 509 aa16.85■□□□□ 0.29
SAPCD1-208ENST00000415669 ZSWIM5Q9P217 1185 aa16.85■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 WDR46O15213 610 aaKnown RBP16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 TLR2O60603 784 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 HOXA7P31268 230 aaPredicted RBP16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 CYB5R4Q7L1T6 521 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 ZSCAN10Q96SZ4 725 aaPredicted RBP16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 TNKSO95271 1327 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 ADGRA2Q96PE1 1338 aa16.84■□□□□ 0.29
SAPCD1-208ENST00000415669 F5H6K3 240 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 GPR25O00155 361 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 NDUFB10O96000 172 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 KLRC3Q07444 240 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 GMCL1P1Q8NEA9 526 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 MKL1Q969V6 931 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 NUP88Q99567 741 aaPredicted RBP16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 MTMR7Q9Y216 660 aa16.83■□□□□ 0.28
SAPCD1-208ENST00000415669 TOP1P11387 765 aaKnown RBP16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 HSPA4P34932 840 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 NOVP48745 357 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 CCDC178Q5BJE1 867 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 FAM83BQ5T0W9 1011 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 SLFN13Q68D06 897 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 CATSPERGQ6ZRH7 1159 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 MB21D2Q8IYB1 491 aaPredicted RBP16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 CHMP4CQ96CF2 233 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
SAPCD1-208ENST00000415669 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 FLOT1O75955 427 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 MCCP23508 829 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 HERVK_113P62684 666 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 RASGRP2Q7LDG7 609 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 CHST3Q7LGC8 479 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 ENAHQ8N8S7 591 aaPredicted RBP16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 TTC14Q96N46 770 aa16.81■□□□□ 0.28
SAPCD1-208ENST00000415669 MYH6P13533 1939 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 ERICH2A1L162 156 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 FKTNO75072 461 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 KRT32Q14532 448 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 IFIT1BQ5T764 474 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 C17orf99Q6UX52 265 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 DGKHQ86XP1 1220 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
SAPCD1-208ENST00000415669 SPDYE16A6NNV3 312 aaPredicted RBP16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 IFIT3O14879 490 aaKnown RBP16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 PRC1O43663 620 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 ECM2O94769 699 aaPredicted RBP16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 BMP3P12645 472 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 MCM5P33992 734 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms