RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TMX4Q9H1E5 349 aaPredicted RBP6.12□□□□□ -1.43
VPS41-205ENST00000414632 RRAGCQ9HB90 399 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 LTBP3Q9NS15 1303 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 TOR4AQ9NXH8 423 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 ZDHHC3Q9NYG2 299 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 MYH13Q9UKX3 1938 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 NSFL1CQ9UNZ2 370 aaKnown RBP6.12□□□□□ -1.43
VPS41-205ENST00000414632 TNFRSF10AO00220 468 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 SPINT1O43278 529 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 ALDH1L1O75891 902 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 RGS20O76081 388 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 DDNO94850 711 aaPredicted RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 CTSHP09668 335 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 HSP90B1P14625 803 aaKnown RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 ITGA6P23229 1130 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 CTSOP43234 321 aaPredicted RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 IDH3AP50213 366 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 POU4F2Q12837 409 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 SF3A1Q15459 793 aaKnown RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS41-205ENST00000414632 IER5Q5VY09 327 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 LMBR1LQ6UX01 489 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 ANKRD18AQ8IVF6 992 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 UBXN4Q92575 508 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 HPS1Q92902 700 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 HSH2DQ96JZ2 352 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 PSMD1Q99460 953 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 NEUROD4Q9HD90 331 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 POLMQ9NP87 494 aaPredicted RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 ANKIB1Q9P2G1 1089 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 USP20Q9Y2K6 914 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 GJA3Q9Y6H8 435 aa6.11□□□□□ -1.43
VPS41-205ENST00000414632 V9GY48 417 aaPredicted RBP6.11□□□□□ -1.43
VPS41-205ENST00000414632 RTL9Q8NET4 1388 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 KIF16BQ96L93 1317 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 ANKRD18BA2A2Z9 1011 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 GLTPD2A6NH11 291 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 SPATA31C2B4DYI2 1134 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 SNAP23O00161 211 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 TNFRSF21O75509 655 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 UFL1O94874 794 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 TRIM27P14373 513 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 INPP5BP32019 993 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 XKR5Q6UX68 686 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 NIM1KQ8IY84 436 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 CMTR1Q8N1G2 835 aaKnown RBP6.1□□□□□ -1.43
VPS41-205ENST00000414632 KLHDC4Q8TBB5 520 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 TBC1D16Q8TBP0 767 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 JDP2Q8WYK2 163 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 CRELD1Q96HD1 420 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 KAZALD1Q96I82 304 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 CDC5LQ99459 802 aaKnown RBP6.1□□□□□ -1.43
VPS41-205ENST00000414632 PLA2G12BQ9BX93 195 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 API5Q9BZZ5 524 aaKnown RBP6.1□□□□□ -1.43
VPS41-205ENST00000414632 TGIF2Q9GZN2 237 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 USP44Q9H0E7 712 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 BICC1Q9H694 974 aaKnown RBP6.1□□□□□ -1.43
VPS41-205ENST00000414632 CCSER2Q9H7U1 834 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 DBNDD1Q9H9R9 158 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 POLLQ9UGP5 575 aa6.1□□□□□ -1.43
VPS41-205ENST00000414632 FNDC3AQ9Y2H6 1198 aaKnown RBP6.1□□□□□ -1.43
VPS41-205ENST00000414632 GPC6Q9Y625 555 aaPredicted RBP6.1□□□□□ -1.43
VPS41-205ENST00000414632 ADAMTSL1Q8N6G6 1762 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 POTECB2RU33 542 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 PLIN1O60240 522 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 TAF5LO75529 589 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 RAD17O75943 681 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 UPP2O95045 317 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 CSF1RP07333 972 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 EIF4BP23588 611 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 KLRK1P26718 216 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 IGHMBP2P38935 993 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 CCT4P50991 539 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 EIF6P56537 245 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 IFIT5Q13325 482 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 ARSJQ5FYB0 599 aaPredicted RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 LRRC69Q6ZNQ3 347 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 PRICKLE2Q7Z3G6 844 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 ZNF438Q7Z4V0 828 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 BTLAQ7Z6A9 289 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 TMEM57Q8N5G2 664 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 ANKRD44Q8N8A2 993 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 SUPT20HQ8NEM7 779 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 EPS8L3Q8TE67 593 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 CCDC74AQ96AQ1 378 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 MPHOSPH8Q99549 860 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 MEIS3Q99687 375 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 RTFDC1Q9BY42 306 aaPredicted RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 PUS3Q9BZE2 481 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 KCNQ5Q9NR82 932 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 FOXD3Q9UJU5 478 aaPredicted RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 GGA1Q9UJY5 639 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 MINPP1Q9UNW1 487 aa6.09□□□□□ -1.43
VPS41-205ENST00000414632 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 LRRFIP2Q9Y608 721 aaKnown RBP6.09□□□□□ -1.43
VPS41-205ENST00000414632 UTYO14607 1347 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 XDHP47989 1333 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms