RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 C1QTNF8P60827 252 aa17.85■□□□□ 0.45
LSM5-207ENST00000410044 GMCL1P1Q8NEA9 526 aa17.85■□□□□ 0.45
LSM5-207ENST00000410044 OTUD5Q96G74 571 aa17.85■□□□□ 0.45
LSM5-207ENST00000410044 C12orf42Q96LP6 360 aa17.85■□□□□ 0.45
LSM5-207ENST00000410044 SENP2Q9HC62 589 aa17.85■□□□□ 0.45
LSM5-207ENST00000410044 A0A0G2JLL6 359 aaPredicted RBP17.84■□□□□ 0.45
LSM5-207ENST00000410044 FAM155AB1AL88 458 aaPredicted RBP17.84■□□□□ 0.45
LSM5-207ENST00000410044 SLC10A3P09131 477 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 ANKRD1Q15327 319 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 DEFB115Q30KQ5 88 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 USP17L2Q6R6M4 530 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 PRRT2Q7Z6L0 340 aaPredicted RBP17.84■□□□□ 0.45
LSM5-207ENST00000410044 RASAL3Q86YV0 1011 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 VCPKMTQ9H867 229 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 KAT14Q9H8E8 782 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 EMILIN3Q9NT22 766 aa17.84■□□□□ 0.45
LSM5-207ENST00000410044 F5H6K3 240 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 RCAN1P53805 252 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 KLRC3Q07444 240 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 LPAR1Q92633 364 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 BRF1Q92994 677 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 GOPCQ9HD26 462 aa17.83■□□□□ 0.44
LSM5-207ENST00000410044 TESPA1A2RU30 521 aaPredicted RBP17.82■□□□□ 0.44
LSM5-207ENST00000410044 CCDC69A6NI79 296 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 GTF2A2P52657 109 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 AK2P54819 239 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 FGD1P98174 961 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 ATP2B2Q01814 1243 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 TROAPQ12815 778 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 MTMR2Q13614 643 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 MOGSQ13724 837 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 ZNF274Q96GC6 653 aaPredicted RBP17.82■□□□□ 0.44
LSM5-207ENST00000410044 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
LSM5-207ENST00000410044 ST18O60284 1047 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 DDAH1O94760 285 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 CALM1P0DP23 149 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 CALM2P0DP24 149 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 CALM3P0DP25 149 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 KIAA1755Q5JYT7 1200 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 APOA5Q6Q788 366 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 ZNF654Q8IZM8 581 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 LRRC47Q8N1G4 583 aaKnown RBP17.81■□□□□ 0.44
LSM5-207ENST00000410044 PROCA1Q8NCQ7 364 aaPredicted RBP17.81■□□□□ 0.44
LSM5-207ENST00000410044 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 FEZ1Q99689 392 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
LSM5-207ENST00000410044 NDUFB10O96000 172 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 PDHBP11177 359 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 CETPP11597 493 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 HSPA6P17066 643 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 MCM2P49736 904 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 INHBEP58166 350 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 APOBRQ0VD83 1088 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 PPP2R5BQ15173 497 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 FASTKD5Q7L8L6 764 aaKnown RBP17.8■□□□□ 0.44
LSM5-207ENST00000410044 DCAF4Q8WV16 495 aa17.8■□□□□ 0.44
LSM5-207ENST00000410044 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
LSM5-207ENST00000410044 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 MANSC4A6NHS7 340 aaPredicted RBP17.79■□□□□ 0.44
LSM5-207ENST00000410044 WDR46O15213 610 aaKnown RBP17.79■□□□□ 0.44
LSM5-207ENST00000410044 PDIA3P30101 505 aaKnown RBP17.79■□□□□ 0.44
LSM5-207ENST00000410044 HMGCS2P54868 508 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 SYNE3Q6ZMZ3 975 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 TMOD4Q9NZQ9 345 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 LIMCH1Q9UPQ0 1083 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 NID2Q14112 1375 aa17.79■□□□□ 0.44
LSM5-207ENST00000410044 PLA2G6O60733 806 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 HOXA7P31268 230 aaPredicted RBP17.78■□□□□ 0.44
LSM5-207ENST00000410044 NOGQ13253 232 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 GRM4Q14833 912 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 CYP4F22Q6NT55 531 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 REM2Q8IYK8 340 aaPredicted RBP17.78■□□□□ 0.44
LSM5-207ENST00000410044 SNX21Q969T3 373 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 CAPNS2Q96L46 248 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 ZSCAN31Q96LW9 406 aaPredicted RBP17.78■□□□□ 0.44
LSM5-207ENST00000410044 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
LSM5-207ENST00000410044 PALM3A6NDB9 673 aaPredicted RBP17.77■□□□□ 0.44
LSM5-207ENST00000410044 ZBTB43O43298 467 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 BMP3P12645 472 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 VCAM1P19320 739 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 SMARCA1P28370 1054 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 SLC1A4P43007 532 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 TM4SF4P48230 202 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 ZNF543Q08ER8 600 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.44
LSM5-207ENST00000410044 ASPRV1Q53RT3 343 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 GPATCH4Q5T3I0 446 aaKnown RBP17.77■□□□□ 0.44
LSM5-207ENST00000410044 GPAT2Q6NUI2 795 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms