RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.34□□□□□ -1.07
LSM5-203ENST00000409782 ATRNO75882 1429 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 RGS12O14924 1447 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
LSM5-203ENST00000409782 RXRBP28702 533 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 TTBK2Q6IQ55 1244 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 GOLM1Q8NBJ4 401 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 CPLX3Q8WVH0 158 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 MUC3BQ9H195 1237 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 NWD2Q9ULI1 1742 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 CRYBG1Q9Y4K1 1723 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 SLIT2O94813 1529 aa8.33□□□□□ -1.08
LSM5-203ENST00000409782 PPIP5K1Q6PFW1 1433 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 FBXO24O75426 580 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 PTPRAP18433 802 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 TFE3P19532 575 aaPredicted RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 CRKP46108 304 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 GRIA4P48058 902 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 IGBP1P78318 339 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 RBM6P78332 1123 aaKnown RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 MAP3K11Q16584 847 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 HNRNPLLQ8WVV9 542 aaKnown RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 SEC31BQ9NQW1 1179 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 TRPC5Q9UL62 973 aaPredicted RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 NOP58Q9Y2X3 529 aaKnown RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 R3HCC1Q9Y3T6 440 aaKnown RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 PLCH1Q4KWH8 1693 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 BRD4O60885 1362 aaPredicted RBP8.32□□□□□ -1.08
LSM5-203ENST00000409782 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
LSM5-203ENST00000409782 CLSPNQ9HAW4 1339 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 hCG_2014768A0A024R1R8 64 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 NFKBIEO00221 500 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
LSM5-203ENST00000409782 APBA3O96018 575 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 CDC27P30260 824 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 GIPRP48546 466 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 FAM160A1Q05DH4 1040 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 NBPF8Q3BBV2 869 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
LSM5-203ENST00000409782 REXO1Q8N1G1 1221 aaKnown RBP8.31□□□□□ -1.08
LSM5-203ENST00000409782 NXPE3Q969Y0 559 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
LSM5-203ENST00000409782 METTL14Q9HCE5 456 aaKnown RBP8.31□□□□□ -1.08
LSM5-203ENST00000409782 USP21Q9UK80 565 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 TLR6Q9Y2C9 796 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 SAMM50Q9Y512 469 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 PPME1Q9Y570 386 aa8.31□□□□□ -1.08
LSM5-203ENST00000409782 PHRF1Q9P1Y6 1649 aaKnown RBP8.31□□□□□ -1.08
LSM5-203ENST00000409782 EVC2Q86UK5 1308 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 A0A096LPE4 126 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 A0A1W2PPZ6 126 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 F6X3S4 739 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 IMPDH2P12268 514 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 ELNP15502 786 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 MPP2Q14168 576 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 GATAD2BQ8WXI9 593 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 ANAPC16Q96DE5 110 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 NRKQ7Z2Y5 1582 aa8.3□□□□□ -1.08
LSM5-203ENST00000409782 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
LSM5-203ENST00000409782 ACEP12821 1306 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 USP6P35125 1406 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 KRBA1A5PL33 1030 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 ACPPP15309 386 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 CABP4P57796 275 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 RASGRF1Q13972 1273 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 ARSHQ5FYA8 562 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 FAM117BQ6P1L5 589 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 MAP4K3Q8IVH8 894 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 FMR1NBQ8N0W7 255 aaPredicted RBP8.29□□□□□ -1.08
LSM5-203ENST00000409782 RBBP8NLQ8NC74 664 aaPredicted RBP8.29□□□□□ -1.08
LSM5-203ENST00000409782 NACC1Q96RE7 527 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 CARD11Q9BXL7 1154 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 NRAPQ86VF7 1730 aa8.29□□□□□ -1.08
LSM5-203ENST00000409782 GLI3P10071 1580 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 FAM221AA4D161 298 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 FAM221BA6H8Z2 402 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 SMAD7O15105 426 aaKnown RBP8.28□□□□□ -1.08
LSM5-203ENST00000409782 TRPA1O75762 1119 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 BAG6P46379 1132 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 ZNF165P49910 485 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
LSM5-203ENST00000409782 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 DDR2Q16832 855 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 CWF19L2Q2TBE0 894 aaKnown RBP8.28□□□□□ -1.08
LSM5-203ENST00000409782 FBXO11Q86XK2 927 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 UNC5CLQ8IV45 518 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 ADAM19Q9H013 955 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 MIR1-1HGQ9H1L0 117 aa8.28□□□□□ -1.08
LSM5-203ENST00000409782 ZNRF3Q9ULT6 936 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms