RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ZNF654Q8IZM8 581 aa23.97■■□□□ 1.43
VSX1-203ENST00000409285 ZNF274Q96GC6 653 aaPredicted RBP23.97■■□□□ 1.43
VSX1-203ENST00000409285 MAP3K14Q99558 947 aa23.97■■□□□ 1.43
VSX1-203ENST00000409285 RLFQ13129 1914 aa23.97■■□□□ 1.43
VSX1-203ENST00000409285 CD2BP2O95400 341 aaKnown RBP23.96■■□□□ 1.43
VSX1-203ENST00000409285 ECE1P42892 770 aa23.96■■□□□ 1.43
VSX1-203ENST00000409285 TROAPQ12815 778 aa23.96■■□□□ 1.43
VSX1-203ENST00000409285 CCDC84Q86UT8 332 aaPredicted RBP23.96■■□□□ 1.43
VSX1-203ENST00000409285 ACER1Q8TDN7 264 aa23.96■■□□□ 1.43
VSX1-203ENST00000409285 BRPF3Q9ULD4 1205 aa23.96■■□□□ 1.43
VSX1-203ENST00000409285 LIMCH1Q9UPQ0 1083 aa23.96■■□□□ 1.43
VSX1-203ENST00000409285 SLC12A7Q9Y666 1083 aa23.96■■□□□ 1.43
VSX1-203ENST00000409285 KLF18A0A0U1RQI7 1052 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 USP17L10C9JJH3 530 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 SNHG28P0DPA3 235 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 BACE1P56817 501 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 APOBRQ0VD83 1088 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 NFXL1Q6ZNB6 911 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 CATIPQ7Z7H3 387 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 LRRC47Q8N1G4 583 aaKnown RBP23.95■■□□□ 1.42
VSX1-203ENST00000409285 OPTNQ96CV9 577 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 SLC10A4Q96EP9 437 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 GOPCQ9HD26 462 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 KCNH4Q9UQ05 1017 aa23.95■■□□□ 1.42
VSX1-203ENST00000409285 C19orf81C9J6K1 198 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 CALM1P0DP23 149 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 CALM2P0DP24 149 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 CALM3P0DP25 149 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 USP14P54578 494 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 ATP2B2Q01814 1243 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 VCPKMTQ9H867 229 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 TPCN1Q9ULQ1 816 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 CXCL11O14625 94 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 ZBTB48P10074 688 aaPredicted RBP23.94■■□□□ 1.42
VSX1-203ENST00000409285 SPP2Q13103 211 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 SH3D19Q5HYK7 790 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 CNKSR2Q8WXI2 1034 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 LPAR1Q92633 364 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 OTUD5Q96G74 571 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 GMCL1Q96IK5 515 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 C12orf42Q96LP6 360 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 FEZ1Q99689 392 aa23.94■■□□□ 1.42
VSX1-203ENST00000409285 ABT1Q9ULW3 272 aaKnown RBP23.94■■□□□ 1.42
VSX1-203ENST00000409285 F5H6K3 240 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 IRF6O14896 467 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 ZBTB43O43298 467 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 PDIA3P30101 505 aaKnown RBP23.93■■□□□ 1.42
VSX1-203ENST00000409285 KLRC3Q07444 240 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 MTMR2Q13614 643 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 PPP2R5BQ15173 497 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 SYNE3Q6ZMZ3 975 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 WNK4Q96J92 1243 aa23.93■■□□□ 1.42
VSX1-203ENST00000409285 ZSCAN31Q96LW9 406 aaPredicted RBP23.93■■□□□ 1.42
VSX1-203ENST00000409285 SH2B1Q9NRF2 756 aaPredicted RBP23.93■■□□□ 1.42
VSX1-203ENST00000409285 GOLGA8BA8MQT2 603 aa23.92■■□□□ 1.42
VSX1-203ENST00000409285 PDHBP11177 359 aa23.92■■□□□ 1.42
VSX1-203ENST00000409285 HPS5Q9UPZ3 1129 aa23.92■■□□□ 1.42
VSX1-203ENST00000409285 A0A0G2JLL6 359 aaPredicted RBP23.91■■□□□ 1.42
VSX1-203ENST00000409285 TRIM75PA6NK02 468 aa23.91■■□□□ 1.42
VSX1-203ENST00000409285 NDUFB10O96000 172 aa23.91■■□□□ 1.42
VSX1-203ENST00000409285 GJA5P36382 358 aa23.91■■□□□ 1.42
VSX1-203ENST00000409285 RGMBQ6NW40 437 aa23.91■■□□□ 1.42
VSX1-203ENST00000409285 USP17L2Q6R6M4 530 aa23.91■■□□□ 1.42
VSX1-203ENST00000409285 PRRT2Q7Z6L0 340 aaPredicted RBP23.91■■□□□ 1.42
VSX1-203ENST00000409285 DCAF4Q8WV16 495 aa23.91■■□□□ 1.42
VSX1-203ENST00000409285 BAZ2BQ9UIF8 2168 aaKnown RBP23.9■■□□□ 1.42
VSX1-203ENST00000409285 A0A0G2JMZ2 1700 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 PFKFB2O60825 505 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 GRM4Q14833 912 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 ME3Q16798 604 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 SPRYD7Q5W111 196 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 MICU3Q86XE3 530 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 RASAL3Q86YV0 1011 aa23.9■■□□□ 1.42
VSX1-203ENST00000409285 COL11A1P12107 1806 aaPredicted RBP23.9■■□□□ 1.42
VSX1-203ENST00000409285 THSD7BQ9C0I4 1608 aa23.89■■□□□ 1.42
VSX1-203ENST00000409285 METAP2P50579 478 aaKnown RBP eCLIP23.89■■□□□ 1.42
VSX1-203ENST00000409285 ASPRV1Q53RT3 343 aa23.89■■□□□ 1.42
VSX1-203ENST00000409285 SLFN13Q68D06 897 aa23.89■■□□□ 1.42
VSX1-203ENST00000409285 FANCBQ8NB91 859 aa23.89■■□□□ 1.42
VSX1-203ENST00000409285 PROCA1Q8NCQ7 364 aaPredicted RBP23.89■■□□□ 1.42
VSX1-203ENST00000409285 MYL10Q9BUA6 226 aa23.89■■□□□ 1.42
VSX1-203ENST00000409285 EMILIN3Q9NT22 766 aa23.89■■□□□ 1.42
VSX1-203ENST00000409285 RASSF10A6NK89 507 aa23.88■■□□□ 1.41
VSX1-203ENST00000409285 WDR46O15213 610 aaKnown RBP23.88■■□□□ 1.41
VSX1-203ENST00000409285 SLC10A3P09131 477 aa23.88■■□□□ 1.41
VSX1-203ENST00000409285 KIF5BP33176 963 aa23.88■■□□□ 1.41
VSX1-203ENST00000409285 ZNF157P51786 506 aaPredicted RBP23.88■■□□□ 1.41
VSX1-203ENST00000409285 GPATCH4Q5T3I0 446 aaKnown RBP23.88■■□□□ 1.41
VSX1-203ENST00000409285 GTF3C6Q969F1 213 aa23.88■■□□□ 1.41
VSX1-203ENST00000409285 LARP6Q9BRS8 491 aaKnown RBP23.88■■□□□ 1.41
VSX1-203ENST00000409285 RBM28Q9NW13 759 aaKnown RBP23.88■■□□□ 1.41
VSX1-203ENST00000409285 RBM19Q9Y4C8 960 aaKnown RBP23.88■■□□□ 1.41
VSX1-203ENST00000409285 CCDC196A0A1B0GTZ2 297 aa23.87■■□□□ 1.41
VSX1-203ENST00000409285 PALM3A6NDB9 673 aaPredicted RBP23.87■■□□□ 1.41
VSX1-203ENST00000409285 GOLGA8AA7E2F4 631 aa23.87■■□□□ 1.41
VSX1-203ENST00000409285 K7ELQ4 463 aaPredicted RBP23.87■■□□□ 1.41
VSX1-203ENST00000409285 LARGE1O95461 756 aa23.87■■□□□ 1.41
VSX1-203ENST00000409285 HMGCS2P54868 508 aa23.87■■□□□ 1.41
VSX1-203ENST00000409285 ZNF543Q08ER8 600 aa23.87■■□□□ 1.41
VSX1-203ENST00000409285 SNAPC2Q13487 334 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms