RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TBC1D8O95759 1140 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 TXKP42681 527 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 GUCY2FP51841 1108 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 DPYDQ12882 1025 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 ADAT2Q7Z6V5 191 aaKnown RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 ZBTB38Q8NAP3 1195 aaPredicted RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 EHD4Q9H223 541 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 CEP131Q9UPN4 1083 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 BCS1LQ9Y276 419 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RICTORQ6R327 1708 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 EFCAB8A8MWE9 144 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 NCK2O43639 380 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 DEXIO95424 95 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 CASP7P55210 303 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 MORC3Q14149 939 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 PTPAQ15257 358 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 KRT31Q15323 416 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 TBC1D10BQ4KMP7 808 aaPredicted RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 MAPKAPK5Q8IW41 473 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 IGDCC4Q8TDY8 1250 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 PAGE5Q96GU1 130 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 NAPGQ99747 312 aaPredicted RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 KRT23Q9C075 422 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 FAM204AQ9H8W3 233 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 LIG3P49916 1009 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 MKRN4PQ13434 485 aaPredicted RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 SND1Q7KZF4 910 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNX13-201ENST00000409076 MPHOSPH10O00566 681 aaKnown RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 EIF3JO75822 258 aaKnown RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 CHRNDQ07001 517 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
SNX13-201ENST00000409076 CCDC148Q8NFR7 591 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 TRIM31Q9BZY9 425 aa9.38□□□□□ -0.91
SNX13-201ENST00000409076 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 KRT18P05783 430 aaKnown RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 PDE6BP35913 854 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 HLTFQ14527 1009 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNX13-201ENST00000409076 CACNA2D4Q7Z3S7 1137 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 CRACR2BQ8N4Y2 399 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 HSD3B7Q9H2F3 369 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 KAT14Q9H8E8 782 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PACSIN2Q9UNF0 486 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 LUC7L2Q9Y383 392 aaKnown RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PRDX5P30044 214 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 TECP42680 631 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PLCD1P51178 756 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PDE4DQ08499 809 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PAK1Q13153 545 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 TMEM87BQ96K49 555 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 CWC15Q9P013 229 aaKnown RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 FRMPD2Q68DX3 1309 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 EXOC5O00471 708 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 PLEKP08567 350 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 EPS15P42566 896 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 CAVIN4Q5BKX8 364 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 TCERG1LQ5VWI1 586 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 CSGALNACT2Q8N6G5 542 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 LPIN2Q92539 896 aa9.37□□□□□ -0.91
SNX13-201ENST00000409076 BIN2Q9UBW5 565 aaPredicted RBP9.37□□□□□ -0.91
SNX13-201ENST00000409076 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 ATP1A1P05023 1023 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 TFAP4Q01664 338 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 MAP9Q49MG5 647 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 C2CD5Q86YS7 1000 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 STAG2Q8N3U4 1231 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 UHMK1Q8TAS1 419 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 GOLPH3Q9H4A6 298 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 MLXIPQ9HAP2 919 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 TMCO5BA8MYB1 307 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 PDE8AO60658 829 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 H2AFXP16104 143 aaPredicted RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 COPB1P53618 953 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms