RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 PEX10O60683 326 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 GNRH1P01148 92 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L24Q0WX57 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 SLC9C1Q4G0N8 1177 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 NBPF11Q86T75 865 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 CLEC10AQ8IUN9 316 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 ZNF444Q8N0Y2 327 aaPredicted RBP12.34□□□□□ -0.43
FAM49A-202ENST00000406434 RAET1EQ8TD07 263 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 FAM227BQ96M60 508 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 ARHGEF10LQ9HCE6 1279 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 HELLSQ9NRZ9 838 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 SRRDQ9UH36 339 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 TNPO2O14787 897 aaKnown RBP12.33□□□□□ -0.44
FAM49A-202ENST00000406434 RAD21O60216 631 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 PRDM1O75626 825 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 PRMT2P55345 433 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 HERVK_113P62684 666 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 ICA1Q05084 483 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
FAM49A-202ENST00000406434 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 SH3TC2Q8TF17 1288 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 RPAP3Q9H6T3 665 aaPredicted RBP12.33□□□□□ -0.44
FAM49A-202ENST00000406434 BIN2Q9UBW5 565 aaPredicted RBP12.33□□□□□ -0.44
FAM49A-202ENST00000406434 GABRQQ9UN88 632 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 MYPNQ86TC9 1320 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
FAM49A-202ENST00000406434 SLC3A2P08195 630 aaKnown RBP12.32□□□□□ -0.44
FAM49A-202ENST00000406434 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
FAM49A-202ENST00000406434 VCAM1P19320 739 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 SDSP20132 328 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 PRKCZQ05513 592 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 CATSPERGQ6ZRH7 1159 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 SIAH1Q8IUQ4 282 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 CCAR1Q8IX12 1150 aaKnown RBP12.32□□□□□ -0.44
FAM49A-202ENST00000406434 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 COA7Q96BR5 231 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 KANSL2Q9H9L4 492 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 DOCK3Q8IZD9 2030 aa12.32□□□□□ -0.44
FAM49A-202ENST00000406434 MGAMO43451 1857 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 A0A0D9SFI3 127 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 RASA1P20936 1047 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 PDE4AP27815 886 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 PDE4BQ07343 736 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 PPARAQ07869 468 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 Q3C1V9 767 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 PHF12Q96QT6 1004 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 SH2D4AQ9H788 454 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 TXNRD2Q9NNW7 524 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 RBPJLQ9UBG7 517 aa12.31□□□□□ -0.44
FAM49A-202ENST00000406434 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 FLT3LGP49771 235 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 FAM47AQ5JRC9 791 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 KIAA1755Q5JYT7 1200 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 ARMC5Q96C12 935 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 DIAPH3Q9NSV4 1193 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 TMX2Q9Y320 296 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 GRK4P32298 578 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 RGS19P49795 217 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 ERVK-24P63145 666 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 TFAP4Q01664 338 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 COG2Q14746 738 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 ZNF589Q86UQ0 364 aaPredicted RBP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 TICAM2Q86XR7 235 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
FAM49A-202ENST00000406434 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
FAM49A-202ENST00000406434 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 FOXP2O15409 715 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 ADCY3O60266 1144 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 FGAP02671 866 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 TSPY3P0CV98 308 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 TSPY8P0CW00 308 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
FAM49A-202ENST00000406434 ALX1Q15699 326 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 LPAR1Q92633 364 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
FAM49A-202ENST00000406434 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
FAM49A-202ENST00000406434 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms