RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 LIFRP42702 1097 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 MECOMQ03112 1051 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 PPP2R3AQ06190 1150 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
GAREM2-201ENST00000401533 TAF4BQ92750 862 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 USP8P40818 1118 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 DOK7Q18PE1 504 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 CCDC122Q5T0U0 273 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 CNGA4Q8IV77 575 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 FERMT2Q96AC1 680 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 SMCO2A6NFE2 343 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 AP5Z1O43299 807 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 FCHSD1Q86WN1 690 aa20.88■□□□□ 0.93
GAREM2-201ENST00000401533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.88■□□□□ 0.93
GAREM2-201ENST00000401533 TMCO5BA8MYB1 307 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 TMEM232C9JQI7 657 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
GAREM2-201ENST00000401533 LRRC37A3O60309 1634 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 FGFR1OPO95684 399 aaKnown RBP20.87■□□□□ 0.93
GAREM2-201ENST00000401533 CYLC1P35663 651 aaPredicted RBP20.87■□□□□ 0.93
GAREM2-201ENST00000401533 TECP42680 631 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 ETF1P62495 437 aaKnown RBP20.87■□□□□ 0.93
GAREM2-201ENST00000401533 SLC44A5Q8NCS7 719 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 PPP6R2O75170 966 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 PAFAH1B1P43034 410 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 FAM114A1Q8IWE2 563 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 NOC4LQ9BVI4 516 aaKnown RBP20.87■□□□□ 0.93
GAREM2-201ENST00000401533 MAN1B1Q9UKM7 699 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 SAMM50Q9Y512 469 aa20.87■□□□□ 0.93
GAREM2-201ENST00000401533 UBN2Q6ZU65 1347 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 PLCG2P16885 1265 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 ZYXQ15942 572 aaKnown RBP20.86■□□□□ 0.93
GAREM2-201ENST00000401533 CUL5Q93034 780 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 SPAG5Q96R06 1193 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 TRAF5O00463 557 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 NONOQ15233 471 aaKnown RBP eCLIP20.86■□□□□ 0.93
GAREM2-201ENST00000401533 GOLGA1Q92805 767 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 MINPP1Q9UNW1 487 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 FAM208AQ9UK61 1670 aaKnown RBP20.86■□□□□ 0.93
GAREM2-201ENST00000401533 FOXP1Q9H334 677 aaPredicted RBP20.86■□□□□ 0.93
GAREM2-201ENST00000401533 PKD2L1Q9P0L9 805 aa20.86■□□□□ 0.93
GAREM2-201ENST00000401533 ARPP21Q9UBL0 812 aaPredicted RBP20.86■□□□□ 0.93
GAREM2-201ENST00000401533 MSL1Q68DK7 614 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 RNF26Q9BY78 433 aaPredicted RBP20.85■□□□□ 0.93
GAREM2-201ENST00000401533 VEZTQ9HBM0 779 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 LRWD1Q9UFC0 647 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 PPP2R2CQ9Y2T4 447 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 BTDP43251 543 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 PLS1Q14651 629 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 PPP2R5BQ15173 497 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 SHC4Q6S5L8 630 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 PPP1R13BQ96KQ4 1090 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 GDAP1L1Q96MZ0 367 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 MST1RQ04912 1400 aa20.85■□□□□ 0.93
GAREM2-201ENST00000401533 RNASE9P60153 205 aaKnown RBP20.84■□□□□ 0.93
GAREM2-201ENST00000401533 PPARDQ03181 441 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 KIF5AQ12840 1032 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 SV2BQ7L1I2 683 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 CABP7Q86V35 215 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 PRPF4BQ13523 1007 aaKnown RBP20.84■□□□□ 0.93
GAREM2-201ENST00000401533 NELFCDQ8IXH7 590 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 GBP3Q9H0R5 595 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
GAREM2-201ENST00000401533 ALDH8A1Q9H2A2 487 aaPredicted RBP20.84■□□□□ 0.93
GAREM2-201ENST00000401533 CSF1RP07333 972 aa20.83■□□□□ 0.93
GAREM2-201ENST00000401533 USP17L2Q6R6M4 530 aa20.83■□□□□ 0.93
GAREM2-201ENST00000401533 ENAHQ8N8S7 591 aaPredicted RBP20.83■□□□□ 0.93
GAREM2-201ENST00000401533 SNX29Q8TEQ0 813 aa20.83■□□□□ 0.93
GAREM2-201ENST00000401533 FAM207AQ9NSI2 230 aaPredicted RBP20.83■□□□□ 0.93
GAREM2-201ENST00000401533 TTF2Q9UNY4 1162 aaKnown RBP20.83■□□□□ 0.93
GAREM2-201ENST00000401533 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.93
GAREM2-201ENST00000401533 PLCD1P51178 756 aa20.83■□□□□ 0.93
GAREM2-201ENST00000401533 HLTFQ14527 1009 aaKnown RBP eCLIP20.83■□□□□ 0.93
GAREM2-201ENST00000401533 SLIT3O75094 1523 aa20.83■□□□□ 0.92
GAREM2-201ENST00000401533 USH1GQ495M9 461 aa20.83■□□□□ 0.92
GAREM2-201ENST00000401533 RBM26Q5T8P6 1007 aaKnown RBP20.83■□□□□ 0.92
GAREM2-201ENST00000401533 TBC1D9BQ66K14 1250 aa20.83■□□□□ 0.92
GAREM2-201ENST00000401533 PLEKHA4Q9H4M7 779 aa20.83■□□□□ 0.92
GAREM2-201ENST00000401533 OGFRQ9NZT2 677 aa20.83■□□□□ 0.92
GAREM2-201ENST00000401533 PRR29P0C7W0 189 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 PLA2G4DQ86XP0 818 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 REXO1Q8N1G1 1221 aaKnown RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 RBM17Q96I25 401 aaKnown RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 MARF1Q9Y4F3 1742 aaKnown RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 CASP14P31944 242 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 ODF2Q5BJF6 829 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 IQCEQ6IPM2 695 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 DHX37Q8IY37 1157 aaKnown RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 EPB41L4AQ9HCS5 686 aaPredicted RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 CPDO75976 1380 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 IQCB1Q15051 598 aa20.82■□□□□ 0.92
GAREM2-201ENST00000401533 CWC15Q9P013 229 aaKnown RBP20.82■□□□□ 0.92
GAREM2-201ENST00000401533 OVOS2A0A0G2JMS6 1433 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 KRT86O43790 486 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 CASP7P55210 303 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 TMEM132AQ24JP5 1023 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms