RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ANKRD20A8PQ5CZ79 823 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 ANKRD20A2Q5SQ80 823 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 ANKRD20A1Q5TYW2 823 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 IQCDQ96DY2 449 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 ACEP12821 1306 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 SART1O43290 800 aaKnown RBP12.8□□□□□ -0.36
HLCS-202ENST00000399120 LRMPQ12912 555 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 CABP7Q86V35 215 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 PLEKHA4Q9H4M7 779 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
HLCS-202ENST00000399120 FAM8A1Q9UBU6 413 aa12.8□□□□□ -0.36
HLCS-202ENST00000399120 PPP2R5AQ15172 486 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 HOOK2Q96ED9 719 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 ZMAT2Q96NC0 199 aaKnown RBP12.79□□□□□ -0.36
HLCS-202ENST00000399120 NR1I2O75469 434 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 SLC8A1P32418 973 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 RPGRIP1Q96KN7 1286 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
HLCS-202ENST00000399120 ECE1P42892 770 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 OTUD6AQ7L8S5 288 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
HLCS-202ENST00000399120 MAST3O60307 1309 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 GNGT2O14610 69 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 PFDN1O60925 122 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 LMNB1P20700 586 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 USH1GQ495M9 461 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
HLCS-202ENST00000399120 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 GPC4O75487 556 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 MTX1Q13505 466 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 POSTNQ15063 836 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 DEPTORQ8TB45 409 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 CCDC124Q96CT7 223 aaKnown RBP12.79□□□□□ -0.36
HLCS-202ENST00000399120 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
HLCS-202ENST00000399120 THAP12O43422 761 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 UFL1O94874 794 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 ASPHQ12797 758 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 PPP2R5EQ16537 467 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
HLCS-202ENST00000399120 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 ANAPC5Q9UJX4 755 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 ANGPTL3Q9Y5C1 460 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 KRIT1O00522 736 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 STAT1P42224 750 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 BZW2Q9Y6E2 419 aaKnown RBP12.78□□□□□ -0.36
HLCS-202ENST00000399120 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
HLCS-202ENST00000399120 SPATS2Q86XZ4 545 aaKnown RBP12.78□□□□□ -0.36
HLCS-202ENST00000399120 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 SPC25Q9HBM1 224 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 CHMLP26374 656 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 PRPSAP1Q14558 356 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 CAPN12Q6ZSI9 719 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 RAB44Q7Z6P3 723 aaPredicted RBP12.78□□□□□ -0.36
HLCS-202ENST00000399120 DRC3Q9H069 523 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 DIS3L2Q8IYB7 885 aaKnown RBP12.78□□□□□ -0.36
HLCS-202ENST00000399120 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 NFE2L3Q9Y4A8 694 aa12.78□□□□□ -0.36
HLCS-202ENST00000399120 ZNF202O95125 648 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 SLC1A4P43007 532 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.36
HLCS-202ENST00000399120 RDH13Q8NBN7 331 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 CDKL2Q92772 493 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 IWS1Q96ST2 819 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 FAM207AQ9NSI2 230 aaPredicted RBP12.77□□□□□ -0.36
HLCS-202ENST00000399120 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 KCNK3O14649 394 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 NSMFQ6X4W1 530 aa12.77□□□□□ -0.36
HLCS-202ENST00000399120 HNRNPCL2B2RXH8 293 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 HNRNPCL1O60812 293 aaKnown RBP12.77□□□□□ -0.37
HLCS-202ENST00000399120 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
HLCS-202ENST00000399120 ABCB4P21439 1286 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 HIBADHP31937 336 aaKnown RBP12.77□□□□□ -0.37
HLCS-202ENST00000399120 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 LZTS2Q9BRK4 669 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.37
HLCS-202ENST00000399120 LRRD1A4D1F6 860 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 TNNC2P02585 160 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 HP1BP3Q5SSJ5 553 aaPredicted RBP12.77□□□□□ -0.37
HLCS-202ENST00000399120 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 RINT1Q6NUQ1 792 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 CERS3Q8IU89 383 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 NME8Q8N427 588 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 TRIM58Q8NG06 486 aa12.77□□□□□ -0.37
HLCS-202ENST00000399120 BICC1Q9H694 974 aaKnown RBP12.77□□□□□ -0.37
HLCS-202ENST00000399120 VPS41P49754 854 aa12.76□□□□□ -0.37
HLCS-202ENST00000399120 STX1BP61266 288 aa12.76□□□□□ -0.37
HLCS-202ENST00000399120 CWF19L2Q2TBE0 894 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms