RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 HOXA7P31268 230 aaPredicted RBP18.65■□□□□ 0.58
MBD1-207ENST00000398488 USP14P54578 494 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 CREB3L3Q68CJ9 461 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 RCSD1Q6JBY9 416 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 C17orf99Q6UX52 265 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 RASGRP2Q7LDG7 609 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 MKL1Q969V6 931 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 CHMP4CQ96CF2 233 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 RNF41Q9H4P4 317 aaPredicted RBP18.65■□□□□ 0.58
MBD1-207ENST00000398488 ZSWIM5Q9P217 1185 aa18.65■□□□□ 0.58
MBD1-207ENST00000398488 E7EWF7 191 aa18.64■□□□□ 0.58
MBD1-207ENST00000398488 CASC1Q6TDU7 716 aa18.64■□□□□ 0.58
MBD1-207ENST00000398488 NUP88Q99567 741 aaPredicted RBP18.64■□□□□ 0.58
MBD1-207ENST00000398488 RPAP3Q9H6T3 665 aaPredicted RBP18.64■□□□□ 0.58
MBD1-207ENST00000398488 MYH4Q9Y623 1939 aa18.64■□□□□ 0.57
MBD1-207ENST00000398488 TTLL1O95922 423 aa18.64■□□□□ 0.57
MBD1-207ENST00000398488 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
MBD1-207ENST00000398488 CATSPERGQ6ZRH7 1159 aa18.64■□□□□ 0.57
MBD1-207ENST00000398488 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
MBD1-207ENST00000398488 F5H6K3 240 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
MBD1-207ENST00000398488 NDUFB10O96000 172 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 CTGFP29279 349 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 KLRC3Q07444 240 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 ESR2Q92731 530 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 PARK7Q99497 189 aaKnown RBP18.63■□□□□ 0.57
MBD1-207ENST00000398488 TCP11L1Q9NUJ3 509 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 STX8Q9UNK0 236 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 ZSWIM8A7E2V4 1837 aa18.63■□□□□ 0.57
MBD1-207ENST00000398488 RLFQ13129 1914 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 RAD21O60216 631 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 BCRP11274 1271 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 COL13A1Q5TAT6 717 aaPredicted RBP18.62■□□□□ 0.57
MBD1-207ENST00000398488 TMEM47Q9BQJ4 181 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 TXNRD2Q9NNW7 524 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 FBXO28Q9NVF7 368 aa18.62■□□□□ 0.57
MBD1-207ENST00000398488 OSBPP22059 807 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 ANTXR2P58335 489 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 NOM1Q5C9Z4 860 aaKnown RBP18.61■□□□□ 0.57
MBD1-207ENST00000398488 FAM83BQ5T0W9 1011 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 CHST3Q7LGC8 479 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 SH2D4AQ9H788 454 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 PRDM10Q9NQV6 1147 aa18.61■□□□□ 0.57
MBD1-207ENST00000398488 FKTNO75072 461 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 HERVK_113P62684 666 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
MBD1-207ENST00000398488 MB21D2Q8IYB1 491 aaPredicted RBP18.6■□□□□ 0.57
MBD1-207ENST00000398488 CD99L2Q8TCZ2 262 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 LPAR1Q92633 364 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 KRT23Q9C075 422 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 SENP2Q9HC62 589 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
MBD1-207ENST00000398488 CNMDO75829 334 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 SEC24BO95487 1268 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 SP3Q02447 781 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.57
MBD1-207ENST00000398488 Q3C1V9 767 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 SLFN13Q68D06 897 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 ANKRD13CQ8N6S4 541 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
MBD1-207ENST00000398488 GMCL1P1Q8NEA9 526 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 SMCR8Q8TEV9 937 aaPredicted RBP18.59■□□□□ 0.57
MBD1-207ENST00000398488 ZSCAN10Q96SZ4 725 aaPredicted RBP18.59■□□□□ 0.57
MBD1-207ENST00000398488 TANGO6Q9C0B7 1094 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 CNNM2Q9H8M5 875 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 GPHNQ9NQX3 736 aaPredicted RBP18.59■□□□□ 0.57
MBD1-207ENST00000398488 PNMA3Q9UL41 463 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 SPDYE16A6NNV3 312 aaPredicted RBP18.59■□□□□ 0.57
MBD1-207ENST00000398488 WDR46O15213 610 aaKnown RBP18.59■□□□□ 0.57
MBD1-207ENST00000398488 SEC23AQ15436 765 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 ADCK5Q3MIX3 580 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 KCNB2Q92953 911 aa18.59■□□□□ 0.57
MBD1-207ENST00000398488 PARP14Q460N5 1801 aa18.58■□□□□ 0.56
MBD1-207ENST00000398488 MCCP23508 829 aa18.58■□□□□ 0.56
MBD1-207ENST00000398488 ATG4CQ96DT6 458 aa18.58■□□□□ 0.56
MBD1-207ENST00000398488 USP26Q9BXU7 913 aa18.58■□□□□ 0.56
MBD1-207ENST00000398488 BTBD7Q9P203 1132 aa18.58■□□□□ 0.56
MBD1-207ENST00000398488 TNKSO95271 1327 aa18.58■□□□□ 0.56
MBD1-207ENST00000398488 TOP1P11387 765 aaKnown RBP18.57■□□□□ 0.56
MBD1-207ENST00000398488 DSG3P32926 999 aa18.57■□□□□ 0.56
MBD1-207ENST00000398488 HSPA4P34932 840 aa18.57■□□□□ 0.56
MBD1-207ENST00000398488 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
MBD1-207ENST00000398488 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
MBD1-207ENST00000398488 ANKS1AQ92625 1134 aa18.57■□□□□ 0.56
MBD1-207ENST00000398488 FLOT1O75955 427 aa18.56■□□□□ 0.56
MBD1-207ENST00000398488 LACTBP83111 547 aaPredicted RBP18.56■□□□□ 0.56
MBD1-207ENST00000398488 TRDNQ13061 729 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms