RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PDE8BO95263 885 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 ADRA2BP18089 450 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 TRIM22Q8IYM9 498 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 GRAMD1CQ8IYS0 662 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 CRACR2BQ8N4Y2 399 aaPredicted RBP15.13■□□□□ 0.01
TRIM40-207ENST00000396581 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 CCDC51Q96ER9 411 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 CTAGE1Q96RT6 745 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 IRX2Q9BZI1 471 aaPredicted RBP15.13■□□□□ 0.01
TRIM40-207ENST00000396581 CHD4Q14839 1912 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 H3BQF6 201 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 MFAP3LO75121 409 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 RBL2Q08999 1139 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 RTN1Q16799 776 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 IGSF22Q8N9C0 903 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 CSRNP2Q9H175 543 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 ADAM21Q9UKJ8 722 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 KCNJ14Q9UNX9 436 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 MROH5Q6ZUA9 1318 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 A0A0U1RQG5 324 aaPredicted RBP15.12■□□□□ 0.01
TRIM40-207ENST00000396581 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 SF3B3Q15393 1217 aaKnown RBP15.12■□□□□ 0.01
TRIM40-207ENST00000396581 ERFEQ4G0M1 354 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 NYXQ9GZU5 481 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 KIF5CO60282 957 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
TRIM40-207ENST00000396581 FGFR2P21802 821 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
TRIM40-207ENST00000396581 RFC4P35249 363 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 PHKA1P46020 1223 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 NR5A1Q13285 461 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 USP49Q70CQ1 688 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 TMTC2Q8N394 836 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 GSDMAQ96QA5 445 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 NAPBQ9H115 298 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 L1RE1Q9UN81 338 aa15.12■□□□□ 0.01
TRIM40-207ENST00000396581 LRRC10BA6NIK2 292 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 GSG1L2A8MUP6 293 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 CTDSPL2Q05D32 466 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 ZSCAN26Q16670 478 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 PPFIBP1Q86W92 1011 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 GOLGA5Q8TBA6 731 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 TTF2Q9UNY4 1162 aaKnown RBP15.11■□□□□ 0.01
TRIM40-207ENST00000396581 SYNRGQ9UMZ2 1314 aa15.11■□□□□ 0.01
TRIM40-207ENST00000396581 A0A087X0B3 334 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 PPP1R3GB7ZBB8 358 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 TUBBP07437 444 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 DPYDQ12882 1025 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 HDXQ7Z353 690 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 BBXQ8WY36 941 aaPredicted RBP15.1■□□□□ 0.01
TRIM40-207ENST00000396581 PAGE5Q96GU1 130 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 LZTFL1Q9NQ48 299 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 MYO1AQ9UBC5 1043 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
TRIM40-207ENST00000396581 PNPLA7Q6ZV29 1317 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 LAMB2P55268 1798 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 A0A0U1RQJ8 604 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 GYPCP04921 128 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 TPTE2Q6XPS3 522 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 OXER1Q8TDS5 423 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 ATRIPQ8WXE1 791 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 PNKPQ96T60 521 aa15.1■□□□□ 0.01
TRIM40-207ENST00000396581 RNF26Q9BY78 433 aaPredicted RBP15.1■□□□□ 0.01
TRIM40-207ENST00000396581 RPS6KA5O75582 802 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 GNAT2P19087 354 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 IGHMBP2P38935 993 aaKnown RBP15.09■□□□□ 0.01
TRIM40-207ENST00000396581 WTAPQ15007 396 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 SART3Q15020 963 aaKnown RBP15.09■□□□□ 0.01
TRIM40-207ENST00000396581 PUM3Q15397 648 aaKnown RBP15.09■□□□□ 0.01
TRIM40-207ENST00000396581 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
TRIM40-207ENST00000396581 PROM2Q8N271 834 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 FANCBQ8NB91 859 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 LPIN2Q92539 896 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 SHISA4Q96DD7 197 aa15.09■□□□□ 0.01
TRIM40-207ENST00000396581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0.01
TRIM40-207ENST00000396581 CTAGE9A4FU28 777 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 ERLIN1O75477 346 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 MBD4O95243 580 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 BMP15O95972 392 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 WHAMMP3Q1A5X7 153 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 FILIP1LQ4L180 1135 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 C3orf67Q6ZVT6 689 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 TMTC1Q8IUR5 882 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 FERMT2Q96AC1 680 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 CDC5LQ99459 802 aaKnown RBP15.08■□□□□ 0.01
TRIM40-207ENST00000396581 CABP5Q9NP86 173 aa15.08■□□□□ 0.01
TRIM40-207ENST00000396581 LIMA1Q9UHB6 759 aaKnown RBP15.08■□□□□ 0.01
TRIM40-207ENST00000396581 PLSCR1O15162 318 aa15.08■□□□□ 0
TRIM40-207ENST00000396581 RXRBP28702 533 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms