RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 HLFQ16534 295 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 CCDC122Q5T0U0 273 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 LCORLQ8N3X6 602 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 MSANTD4Q8NCY6 345 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 RAB21Q9UL25 225 aa16.16■□□□□ 0.18
CLIP2-203ENST00000395060 PPP1R3GB7ZBB8 358 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 IFNAR1P17181 557 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 LIG3P49916 1009 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
CLIP2-203ENST00000395060 UBAC1Q9BSL1 405 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 SMARCAL1Q9NZC9 954 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 KIF1AQ12756 1690 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 CAMTA1Q9Y6Y1 1673 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 GGCXP38435 758 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 GPATCH11Q8N954 259 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 AFAP1L1Q8TED9 768 aa16.15■□□□□ 0.18
CLIP2-203ENST00000395060 TTF2Q9UNY4 1162 aaKnown RBP16.15■□□□□ 0.18
CLIP2-203ENST00000395060 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.18
CLIP2-203ENST00000395060 IBSPP21815 317 aaPredicted RBP16.14■□□□□ 0.18
CLIP2-203ENST00000395060 C2orf54Q08AI8 447 aa16.14■□□□□ 0.18
CLIP2-203ENST00000395060 AKNAD1Q5T1N1 836 aa16.14■□□□□ 0.18
CLIP2-203ENST00000395060 KIAA1328Q86T90 577 aa16.14■□□□□ 0.18
CLIP2-203ENST00000395060 SMCR8Q8TEV9 937 aaPredicted RBP16.14■□□□□ 0.18
CLIP2-203ENST00000395060 ABCF2Q9UG63 623 aa16.14■□□□□ 0.18
CLIP2-203ENST00000395060 ERCC5P28715 1186 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-203ENST00000395060 CCT5P48643 541 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 ZNF654Q8IZM8 581 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 FANCBQ8NB91 859 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 PSD3Q9NYI0 1048 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 KLK7P49862 253 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 COPB1P53618 953 aaKnown RBP16.14■□□□□ 0.17
CLIP2-203ENST00000395060 NT5DC1Q5TFE4 455 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 FAM71BQ8TC56 605 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 HNRNPLLQ8WVV9 542 aaKnown RBP16.14■□□□□ 0.17
CLIP2-203ENST00000395060 NELFBQ8WX92 580 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 WASF1Q92558 559 aa16.14■□□□□ 0.17
CLIP2-203ENST00000395060 EPN1Q9Y6I3 576 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-203ENST00000395060 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 KCNJ18B7U540 433 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 ADAMTS3O15072 1205 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 USP5P45974 858 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-203ENST00000395060 SLC7A5Q01650 507 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 PTGDRQ13258 359 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 KCNJ12Q14500 433 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
CLIP2-203ENST00000395060 CYP26C1Q6V0L0 522 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 CRACR2AQ9BSW2 395 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 REXO2Q9Y3B8 237 aaKnown RBP16.13■□□□□ 0.17
CLIP2-203ENST00000395060 SAMM50Q9Y512 469 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 MYO1BO43795 1136 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 DEXIO95424 95 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 SYF2O95926 243 aaKnown RBP16.13■□□□□ 0.17
CLIP2-203ENST00000395060 VEGFAP15692 232 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-203ENST00000395060 CXCR5P32302 372 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 PIGBQ92521 554 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 CARD10Q9BWT7 1032 aa16.13■□□□□ 0.17
CLIP2-203ENST00000395060 SCN11AQ9UI33 1791 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 PLEKHG2Q9H7P9 1386 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 ZPR1O75312 459 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 KANK3Q6NY19 840 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 TMTC1Q8IUR5 882 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
CLIP2-203ENST00000395060 JRKLQ9Y4A0 524 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 RIPOR2Q9Y4F9 1068 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 NDUFA10O95299 355 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 PBX1P40424 430 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 EVX2Q03828 476 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 STIM1Q13586 685 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 CDKAL1Q5VV42 579 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
CLIP2-203ENST00000395060 FOXP1Q9H334 677 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-203ENST00000395060 EHD2Q9NZN4 543 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 CEP131Q9UPN4 1083 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 SIPA1L3O60292 1781 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-203ENST00000395060 GSG1L2A8MUP6 293 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
CLIP2-203ENST00000395060 WHAMMP3Q1A5X7 153 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 TRIML1Q8N9V2 468 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 CTAGE1Q96RT6 745 aa16.12■□□□□ 0.17
CLIP2-203ENST00000395060 ANKRD18BA2A2Z9 1011 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLIP2-203ENST00000395060 RRP36Q96EU6 259 aaKnown RBP16.11■□□□□ 0.17
CLIP2-203ENST00000395060 LACRTQ9GZZ8 138 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 GBP3Q9H0R5 595 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 XDHP47989 1333 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 MAGEA9P43362 315 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 BCAMP50895 628 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 RASGRP4Q8TDF6 673 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 ACBD3Q9H3P7 528 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms