RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 MYPNQ86TC9 1320 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 IGKV6D-41A0A0C4DH26 115 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L15C9J2P7 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L13C9JLJ4 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L11C9JVI0 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L18D6R9N7 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L22D6RA61 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L17D6RBQ6 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L19D6RCP7 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L20D6RJB6 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 NMT2O60551 498 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 CNMDO75829 334 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 FCGRTP55899 365 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 TFAP4Q01664 338 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 PRKCZQ05513 592 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 PDE4BQ07343 736 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 USP17L24Q0WX57 530 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 PKN2Q16513 984 aaKnown RBP9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 FAM110CQ1W6H9 321 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 RRP12Q5JTH9 1297 aaKnown RBP9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 CATSPERGQ6ZRH7 1159 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 RASGRP2Q7LDG7 609 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 ZNF444Q8N0Y2 327 aaPredicted RBP9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 LRRC47Q8N1G4 583 aaKnown RBP9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 SH3TC2Q8TF17 1288 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 CEP95Q96GE4 821 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 CCDC136Q96JN2 1154 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 VCPKMTQ9H867 229 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 KANSL2Q9H9L4 492 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 TOMM22Q9NS69 142 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 RBPJLQ9UBG7 517 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
HMGB3P1-201ENST00000393368 NEDD4P46934 1319 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 HIP1O00291 1037 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 TNPO2O14787 897 aaKnown RBP9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 RANBP6O60518 1105 aaKnown RBP9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 NEFLP07196 543 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 SLC3A2P08195 630 aaKnown RBP9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 TSPY3P0CV98 308 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 TSPY8P0CW00 308 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 CHMLP26374 656 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 ALX1Q15699 326 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 Q3C1V9 767 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 PORCNQ9H237 461 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 BTBD7Q9P203 1132 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 CLIP2Q9UDT6 1046 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 SRRDQ9UH36 339 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
HMGB3P1-201ENST00000393368 MYH8P13535 1937 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 GREB1LQ9C091 1923 aaPredicted RBP9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 TSPY2A6NKD2 308 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 NDUFB10O96000 172 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 ERVK-9P63128 1117 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 ERVK-24P63145 666 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 FAM83BQ5T0W9 1011 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 TICAM2Q86XR7 235 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 GPRC5AQ8NFJ5 357 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 SH2D4AQ9H788 454 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 ZNF287Q9HBT7 754 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 IL17RBQ9NRM6 502 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 MTMR4Q9NYA4 1195 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 MORF4L1Q9UBU8 362 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 ANAPC4Q9UJX5 808 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 MTMR7Q9Y216 660 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 PLIN4Q96Q06 1357 aa9.1□□□□□ -0.95
HMGB3P1-201ENST00000393368 ZMYM6O95789 1325 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 F5H6K3 240 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 WDR46O15213 610 aaKnown RBP9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 FLOT1O75955 427 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 ELNP15502 786 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 FLT3LGP49771 235 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 MFAP1P55081 439 aaKnown RBP9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 PTH1RQ03431 593 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 KLRC3Q07444 240 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 SLC9C1Q4G0N8 1177 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 SPDYE1Q8NFV5 336 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 RAET1EQ8TD07 263 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 LPAR1Q92633 364 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 ATG4CQ96DT6 458 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 ZKSCAN3Q9BRR0 538 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 NYAP2Q9P242 653 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 STX8Q9UNK0 236 aa9.09□□□□□ -0.95
HMGB3P1-201ENST00000393368 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 ZNF213O14771 459 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 ORC4O43929 436 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 TTLL1O95922 423 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 GNRH1P01148 92 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 CENPBP07199 599 aaPredicted RBP9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 FGRP09769 529 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 COG2Q14746 738 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 MTFR1Q15390 333 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms