RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF274Q96GC6 653 aaPredicted RBP15.59■□□□□ 0.09
USP44-202ENST00000393091 ADAMTS5Q9UNA0 930 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 USP17L10C9JJH3 530 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 RANBP6O60518 1105 aaKnown RBP15.59■□□□□ 0.09
USP44-202ENST00000393091 PRDM1O75626 825 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 TOB2Q14106 344 aaPredicted RBP15.59■□□□□ 0.09
USP44-202ENST00000393091 FAM47AQ5JRC9 791 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 TMEM47Q9BQJ4 181 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 GOPCQ9HD26 462 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 CALM1P0DP23 149 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 CALM2P0DP24 149 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 CALM3P0DP25 149 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 MAP2K2P36507 400 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 SNAPC2Q13487 334 aa15.59■□□□□ 0.09
USP44-202ENST00000393091 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
USP44-202ENST00000393091 FASTKD5Q7L8L6 764 aaKnown RBP15.59■□□□□ 0.09
USP44-202ENST00000393091 MGAMO43451 1857 aa15.58■□□□□ 0.09
USP44-202ENST00000393091 COL9A3Q14050 684 aaPredicted RBP15.58■□□□□ 0.08
USP44-202ENST00000393091 GPAT2Q6NUI2 795 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 MYH6P13533 1939 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 WDR46O15213 610 aaKnown RBP15.58■□□□□ 0.08
USP44-202ENST00000393091 CETPP11597 493 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 CASTP20810 708 aaKnown RBP15.58■□□□□ 0.08
USP44-202ENST00000393091 ECE1P42892 770 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.58■□□□□ 0.08
USP44-202ENST00000393091 SNX21Q969T3 373 aa15.58■□□□□ 0.08
USP44-202ENST00000393091 TROAPQ12815 778 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 UBAC1Q9BSL1 405 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 MCM2P49736 904 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 GRM4Q14833 912 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 GTF3C2Q8WUA4 911 aaPredicted RBP15.57■□□□□ 0.08
USP44-202ENST00000393091 FZD1Q9UP38 647 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 WTAPQ15007 396 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 SLC4A8Q2Y0W8 1093 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 NOM1Q5C9Z4 860 aaKnown RBP15.57■□□□□ 0.08
USP44-202ENST00000393091 TEX2Q8IWB9 1127 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 AGTPBP1Q9UPW5 1226 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 ZHX2Q9Y6X8 837 aa15.57■□□□□ 0.08
USP44-202ENST00000393091 FDX1P10109 184 aa15.56■□□□□ 0.08
USP44-202ENST00000393091 NOGQ13253 232 aa15.56■□□□□ 0.08
USP44-202ENST00000393091 DEFB115Q30KQ5 88 aa15.56■□□□□ 0.08
USP44-202ENST00000393091 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
USP44-202ENST00000393091 NMT2O60551 498 aa15.56■□□□□ 0.08
USP44-202ENST00000393091 TTLL12Q14166 644 aaPredicted RBP15.56■□□□□ 0.08
USP44-202ENST00000393091 MTMR8Q96EF0 704 aa15.56■□□□□ 0.08
USP44-202ENST00000393091 ERICH2A1L162 156 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 ASPRV1Q53RT3 343 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 TMEM67Q5HYA8 995 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 IFIT1BQ5T764 474 aaKnown RBP15.55■□□□□ 0.08
USP44-202ENST00000393091 FAM177A1Q8N128 213 aaPredicted RBP15.55■□□□□ 0.08
USP44-202ENST00000393091 ACER1Q8TDN7 264 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 LZTS2Q9BRK4 669 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 IFIT3O14879 490 aaKnown RBP15.55■□□□□ 0.08
USP44-202ENST00000393091 PDHBP11177 359 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 ZNF157P51786 506 aaPredicted RBP15.55■□□□□ 0.08
USP44-202ENST00000393091 SREBF2Q12772 1141 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 KIAA1755Q5JYT7 1200 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 GPATCH4Q5T3I0 446 aaKnown RBP15.55■□□□□ 0.08
USP44-202ENST00000393091 SAGE1Q9NXZ1 904 aa15.55■□□□□ 0.08
USP44-202ENST00000393091 MPHOSPH10O00566 681 aaKnown RBP15.54■□□□□ 0.08
USP44-202ENST00000393091 ATP2A1O14983 1001 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 RAB3GAP1Q15042 981 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 CATSPERGQ6ZRH7 1159 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 Q6ZUG5 572 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 CLIP2Q9UDT6 1046 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 F5H6K3 240 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 KLRC3Q07444 240 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 RRP12Q5JTH9 1297 aaKnown RBP15.54■□□□□ 0.08
USP44-202ENST00000393091 APOA5Q6Q788 366 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 PNMA1Q8ND90 353 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 CHMP4CQ96CF2 233 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 KAT14Q9H8E8 782 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 ZNF408Q9H9D4 720 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
USP44-202ENST00000393091 FEM1BQ9UK73 627 aa15.54■□□□□ 0.08
USP44-202ENST00000393091 PLXNB2O15031 1838 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 ZNF543Q08ER8 600 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 FAM160B2Q86V87 743 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 DNAJC5GQ8N7S2 189 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 MAD2L2Q9UI95 211 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 BRPF3Q9ULD4 1205 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 WDR33Q9C0J8 1336 aaKnown RBP15.53■□□□□ 0.08
USP44-202ENST00000393091 NDUFB10O96000 172 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 SPP2Q13103 211 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 PABPC4Q13310 644 aaKnown RBP eCLIP15.53■□□□□ 0.08
USP44-202ENST00000393091 MTMR2Q13614 643 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 ZNF654Q8IZM8 581 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 BRI3BPQ8WY22 251 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 ZSCAN31Q96LW9 406 aaPredicted RBP15.53■□□□□ 0.08
USP44-202ENST00000393091 PNMA2Q9UL42 364 aa15.53■□□□□ 0.08
USP44-202ENST00000393091 PFKFB2O60825 505 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 VCAM1P19320 739 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms