RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
TRAF3IP2-208ENST00000392556 PNMA6EA0A0J9YXQ4 647 aa13.22□□□□□ -0.29
TRAF3IP2-208ENST00000392556 MYO1CO00159 1063 aa13.22□□□□□ -0.29
TRAF3IP2-208ENST00000392556 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
TRAF3IP2-208ENST00000392556 BRD1O95696 1058 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 GCLCP48506 637 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 IRF5Q13568 498 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 TNNI3KQ59H18 835 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 GADL1Q6ZQY3 521 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 GOLGA6L1Q8N7Z2 621 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 PXYLP1Q8TE99 480 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.29
TRAF3IP2-208ENST00000392556 TNNT1P13805 278 aa13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 MCAMP43121 646 aa13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TEX11Q8IYF3 940 aa13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 DOCK1Q14185 1865 aa13.21□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ST18O60284 1047 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CDC45O75419 566 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 GJB1P08034 283 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 NAA16Q6N069 864 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FOXP4Q8IVH2 680 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CYP2C8P10632 490 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CAP2P40123 477 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 DONSONQ9NYP3 566 aa13.2□□□□□ -0.3
TRAF3IP2-208ENST00000392556 KIF1CO43896 1103 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 GJA8P48165 433 aa13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SATB1Q01826 763 aa13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 COA7Q96BR5 231 aa13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 HTATIP2Q9BUP3 242 aa13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 WDR18Q9BV38 432 aa13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TRIM75PA6NK02 468 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ASNSP08243 561 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CTGFP29279 349 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 HSP90AB4PQ58FF6 505 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 GTF3C2Q8WUA4 911 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 JRKLQ9Y4A0 524 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 C19orf81C9J6K1 198 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TPM4P67936 248 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 PRKCZQ05513 592 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 LNPKQ9C0E8 428 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ST7Q9NRC1 585 aa13.18□□□□□ -0.3
TRAF3IP2-208ENST00000392556 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CCL5P13501 91 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 MX1P20591 662 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 PI16Q6UXB8 463 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ADCY3O60266 1144 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SPP2Q13103 211 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 USP26Q9BXU7 913 aa13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-208ENST00000392556 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SWT1Q5T5J6 900 aaKnown RBP13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SRLQ86TD4 932 aa13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 RNF208Q9H0X6 261 aa13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FHOD1Q9Y613 1164 aa13.16□□□□□ -0.3
TRAF3IP2-208ENST00000392556 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FLT3LGP49771 235 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 GPS2Q13227 327 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms