RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
SUMO1-203ENST00000392246 ERICH2A1L162 156 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 BTBD19C9JJ37 291 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 TOP1P11387 765 aaKnown RBP17.54■□□□□ 0.4
SUMO1-203ENST00000392246 MAP2K1Q02750 393 aaPredicted RBP17.54■□□□□ 0.4
SUMO1-203ENST00000392246 DGKZQ13574 1117 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 RCSD1Q6JBY9 416 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 ANKRD23Q86SG2 305 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 ANKS1AQ92625 1134 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 LPAR1Q92633 364 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
SUMO1-203ENST00000392246 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 CEP350Q5VT06 3117 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 TNKSO95271 1327 aa17.54■□□□□ 0.4
SUMO1-203ENST00000392246 IGF2BP3O00425 579 aaKnown RBP eCLIP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 IFIT3O14879 490 aaKnown RBP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 ANTXR2P58335 489 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 ANAPC15P60006 121 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 GPAT2Q6NUI2 795 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 DHX32Q7L7V1 743 aaKnown RBP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 LRRC47Q8N1G4 583 aaKnown RBP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 TMEM47Q9BQJ4 181 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 BACH2Q9BYV9 841 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 ZCCHC17Q9NP64 241 aaKnown RBP17.53■□□□□ 0.4
SUMO1-203ENST00000392246 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
SUMO1-203ENST00000392246 F5H6K3 240 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 PRC1O43663 620 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 RAD21O60216 631 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 ALDH1A1P00352 501 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 KLRC3Q07444 240 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 PABPC4Q13310 644 aaKnown RBP eCLIP17.52■□□□□ 0.49e-8■■■□□ 15.9
SUMO1-203ENST00000392246 SEC23AQ15436 765 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 TREML2Q5T2D2 321 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 JMYQ8N9B5 988 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 GMCL1P1Q8NEA9 526 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 TMEM87BQ96K49 555 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
SUMO1-203ENST00000392246 PDHXO00330 501 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 VCAM1P19320 739 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 KIAA1755Q5JYT7 1200 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 IFIT1BQ5T764 474 aaKnown RBP17.52■□□□□ 0.39
SUMO1-203ENST00000392246 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 SPICE1Q8N0Z3 855 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.39
SUMO1-203ENST00000392246 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
SUMO1-203ENST00000392246 WDR46O15213 610 aaKnown RBP17.51■□□□□ 0.39
SUMO1-203ENST00000392246 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
SUMO1-203ENST00000392246 HOXA7P31268 230 aaPredicted RBP17.51■□□□□ 0.39
SUMO1-203ENST00000392246 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
SUMO1-203ENST00000392246 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
SUMO1-203ENST00000392246 WTAPQ15007 396 aa17.51■□□□□ 0.39
SUMO1-203ENST00000392246 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
SUMO1-203ENST00000392246 BEGAINQ9BUH8 593 aa17.51■□□□□ 0.39
SUMO1-203ENST00000392246 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
SUMO1-203ENST00000392246 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
SUMO1-203ENST00000392246 NDUFB10O96000 172 aa17.5■□□□□ 0.39
SUMO1-203ENST00000392246 OSBPP22059 807 aa17.5■□□□□ 0.39
SUMO1-203ENST00000392246 TMTC2Q8N394 836 aa17.5■□□□□ 0.39
SUMO1-203ENST00000392246 IL17RAQ96F46 866 aa17.5■□□□□ 0.39
SUMO1-203ENST00000392246 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
SUMO1-203ENST00000392246 ZSWIM6Q9HCJ5 1215 aa17.5■□□□□ 0.39
SUMO1-203ENST00000392246 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L15C9J2P7 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L13C9JLJ4 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L11C9JVI0 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L18D6R9N7 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L22D6RA61 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L17D6RBQ6 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L19D6RCP7 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L20D6RJB6 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 RPS6KB1P23443 525 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 USP17L24Q0WX57 530 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 RUFY3Q7L099 469 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 RNF186Q9NXI6 227 aa17.49■□□□□ 0.39
SUMO1-203ENST00000392246 SH2B2O14492 632 aaPredicted RBP17.48■□□□□ 0.39
SUMO1-203ENST00000392246 CPA1P15085 419 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 LIFRP42702 1097 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 TAF1CQ15572 869 aaPredicted RBP17.48■□□□□ 0.39
SUMO1-203ENST00000392246 CATSPERGQ6ZRH7 1159 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 GMCL1Q96IK5 515 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 PARK7Q99497 189 aaKnown RBP17.48■□□□□ 0.39
SUMO1-203ENST00000392246 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 LY9Q9HBG7 655 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 CYP46A1Q9Y6A2 500 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 PCNTO95613 3336 aa17.48■□□□□ 0.39
SUMO1-203ENST00000392246 CA12O43570 354 aa17.47■□□□□ 0.39
SUMO1-203ENST00000392246 TRPA1O75762 1119 aa17.47■□□□□ 0.39
SUMO1-203ENST00000392246 BMP3P12645 472 aa17.47■□□□□ 0.39
SUMO1-203ENST00000392246 SLC1A4P43007 532 aa17.47■□□□□ 0.39
SUMO1-203ENST00000392246 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
SUMO1-203ENST00000392246 IRX3P78415 501 aaPredicted RBP17.47■□□□□ 0.39
SUMO1-203ENST00000392246 FAM83BQ5T0W9 1011 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms