RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PHKA1P46020 1223 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 PLA2G4AP47712 749 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 PAK2Q13177 524 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 CCDC155Q8N6L0 562 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 EIF3CQ99613 913 aaKnown RBP14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 TNKSO95271 1327 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 ST3GAL1Q11201 340 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 LPIN2Q92539 896 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 SH2B2O14492 632 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 SRGAP2O75044 1071 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 MFAP3LO75121 409 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 TNNI2P48788 182 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 GIGYF2Q6Y7W6 1299 aaKnown RBP14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 SV2BQ7L1I2 683 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 TRIM58Q8NG06 486 aa14.66□□□□□ -0.06
TRAPPC9-201ENST00000389328 H7C1D1 291 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 CEP104O60308 925 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 CXCR5P32302 372 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 CYP27A1Q02318 531 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 LRRC27Q9C0I9 530 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 C6orf50Q9HD87 102 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 NIP7Q9Y221 180 aaKnown RBP eCLIP14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 ADGRG1Q9Y653 693 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 MMP1P03956 469 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 RPN1P04843 607 aaKnown RBP14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 TXKP42681 527 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 DNM2P50570 870 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 C2orf54Q08AI8 447 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 FAM47AQ5JRC9 791 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 EFCAB13Q8IY85 973 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 LRRN4CLQ8ND94 238 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 MYCBPQ99417 103 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 EFCC1Q9HA90 598 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 ZSWIM5Q9P217 1185 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 B4DLN1 442 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 TCIRG1Q13488 830 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 CEP85LQ5SZL2 805 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 DNAJC10Q8IXB1 793 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 ENGASEQ8NFI3 743 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 FHOD1Q9Y613 1164 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 PARP3Q9Y6F1 533 aa14.65□□□□□ -0.06
TRAPPC9-201ENST00000389328 A0A0G2JLW4 131 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 HGSO14964 777 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 PPARAQ07869 468 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 MYO1AQ9UBC5 1043 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 CCNT1O60563 726 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 NDUFA10O95299 355 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 FMNL1O95466 1100 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 CTDNEP1O95476 244 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 L2HGDHQ9H9P8 463 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 A0A087WUV0 522 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 A6NNZ2 444 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 GTPBP6O43824 516 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 VIMP08670 466 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 MAGEA9P43362 315 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 TUBB8Q3ZCM7 444 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 PNMA8AQ86V59 439 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 CCDC25Q86WR0 208 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 GSPT2Q8IYD1 628 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 PAIP2Q9BPZ3 127 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 SLC9C1Q4G0N8 1177 aa14.64□□□□□ -0.07
TRAPPC9-201ENST00000389328 BAG3O95817 575 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 VSNL1P62760 191 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 KRT31Q15323 416 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 RBM43Q6ZSC3 357 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 DDX17Q92841 729 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 HYOU1Q9Y4L1 999 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 GOLGA8KD6RF30 607 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 KIF4AO95239 1232 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 EXOSC10Q01780 885 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 ICE2Q659A1 982 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 METTL16Q86W50 562 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 PRKAB2O43741 272 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 IFNAR1P17181 557 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 SLC7A5Q01650 507 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 FEZ2Q9UHY8 353 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 SRPRBQ9Y5M8 271 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 ARHGAP31Q2M1Z3 1444 aa14.63□□□□□ -0.07
TRAPPC9-201ENST00000389328 TMEM110-MUSTN1A8MSY1 372 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 GUCY2DQ02846 1103 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 DCAF17Q5H9S7 520 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 USPL1Q5W0Q7 1092 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 TUBGCP2Q9BSJ2 902 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 TBC1D7Q9P0N9 293 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 IL2RBP14784 551 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 CABP7Q86V35 215 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 PAGE5Q96GU1 130 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 GREM2Q9H772 168 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms