RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 WDR24Q96S15 920 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 DESI2Q9BSY9 194 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 MYH13Q9UKX3 1938 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 PPP1R3GB7ZBB8 358 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 DDAH1O94760 285 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 IL17AQ16552 155 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 ARHGAP29Q52LW3 1261 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 PIK3AP1Q6ZUJ8 805 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
RFC3-201ENST00000380071 CARD6Q9BX69 1037 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 A0A1B0GUL6 1792 aa13.83□□□□□ -0.2
RFC3-201ENST00000380071 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
RFC3-201ENST00000380071 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
RFC3-201ENST00000380071 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
RFC3-201ENST00000380071 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
RFC3-201ENST00000380071 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
RFC3-201ENST00000380071 BLZF1Q9H2G9 400 aa13.82□□□□□ -0.2
RFC3-201ENST00000380071 FAM53CQ9NYF3 392 aa13.82□□□□□ -0.2
RFC3-201ENST00000380071 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
RFC3-201ENST00000380071 NLRP5P59047 1200 aa13.82□□□□□ -0.2
RFC3-201ENST00000380071 GNG11P61952 73 aa13.82□□□□□ -0.2
RFC3-201ENST00000380071 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
RFC3-201ENST00000380071 TXNRD3Q86VQ6 643 aa13.82□□□□□ -0.2
RFC3-201ENST00000380071 SOWAHDA6NJG2 315 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 ORC4O43929 436 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 HIBADHP31937 336 aaKnown RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 MCM7P33993 719 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 CLCN6P51797 869 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 RBL2Q08999 1139 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 SMARCC1Q92922 1105 aaPredicted RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 XDHP47989 1333 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 SPATA31A5Q5VU36 1347 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 SPATA31A7Q8IWB4 1347 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 SYNRGQ9UMZ2 1314 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 SCG2P13521 617 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 CASQ1P31415 396 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 KARSQ15046 597 aaKnown RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 KRT222Q8N1A0 295 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 UBXN4Q92575 508 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 CCDC34Q96HJ3 373 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 MTRQ99707 1265 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 IRX2Q9BZI1 471 aaPredicted RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 EPC1Q9H2F5 836 aa13.81□□□□□ -0.2
RFC3-201ENST00000380071 ADD3Q9UEY8 706 aaKnown RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
RFC3-201ENST00000380071 A0A0U1RQJ8 604 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 AKR1B15C9JRZ8 316 aaPredicted RBP13.8□□□□□ -0.2
RFC3-201ENST00000380071 KIF20AO95235 890 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 BMP15O95972 392 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 CDC25AP30304 524 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 E2F4Q16254 413 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 IGSF22Q8N9C0 903 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 MNS1Q8NEH6 495 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 ATRIPQ8WXE1 791 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
RFC3-201ENST00000380071 TSPY2A6NKD2 308 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 PBX1P40424 430 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
RFC3-201ENST00000380071 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 CTNND2Q9UQB3 1225 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 CASZ1Q86V15 1759 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 DLEC1Q9Y238 1755 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 SCN7AQ01118 1682 aa13.8□□□□□ -0.2
RFC3-201ENST00000380071 SEMA3EO15041 775 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 TADA3O75528 432 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
RFC3-201ENST00000380071 RAD9BQ6WBX8 426 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 ATP8A2Q9NTI2 1148 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 PDXDC2PQ6P474 469 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 IQUBQ8NA54 791 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
RFC3-201ENST00000380071 SRRTQ9BXP5 876 aaKnown RBP13.79□□□□□ -0.2
RFC3-201ENST00000380071 GOLGA6L9A6NEM1 432 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 RRAGBQ5VZM2 374 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
RFC3-201ENST00000380071 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 FHOD1Q9Y613 1164 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
RFC3-201ENST00000380071 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 CASP14P31944 242 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms