RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.85
ITM2B-201ENST00000378549 VCAM1P19320 739 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 CRHR2Q13324 411 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 CFHR5Q9BXR6 569 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 IL17RBQ9NRM6 502 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 TCP11L1Q9NUJ3 509 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 TSKSQ9UJT2 592 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 TAF6LQ9Y6J9 622 aa20.33■□□□□ 0.85
ITM2B-201ENST00000378549 RLFQ13129 1914 aa20.32■□□□□ 0.84
ITM2B-201ENST00000378549 FOXN1O15353 648 aa20.32■□□□□ 0.84
ITM2B-201ENST00000378549 TBC1D8O95759 1140 aa20.32■□□□□ 0.84
ITM2B-201ENST00000378549 OSBPP22059 807 aa20.32■□□□□ 0.84
ITM2B-201ENST00000378549 CTCFP49711 727 aaPredicted RBP20.32■□□□□ 0.84
ITM2B-201ENST00000378549 IRX3P78415 501 aaPredicted RBP20.32■□□□□ 0.84
ITM2B-201ENST00000378549 CCDC178Q5BJE1 867 aa20.32■□□□□ 0.84
ITM2B-201ENST00000378549 LRRC47Q8N1G4 583 aaKnown RBP20.32■□□□□ 0.84
ITM2B-201ENST00000378549 UBAC1Q9BSL1 405 aa20.32■□□□□ 0.84
ITM2B-201ENST00000378549 MGAMO43451 1857 aa20.31■□□□□ 0.84
ITM2B-201ENST00000378549 STOX1Q6ZVD7 989 aa20.31■□□□□ 0.84
ITM2B-201ENST00000378549 SPICE1Q8N0Z3 855 aa20.31■□□□□ 0.84
ITM2B-201ENST00000378549 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
ITM2B-201ENST00000378549 MKL1Q969V6 931 aa20.31■□□□□ 0.84
ITM2B-201ENST00000378549 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
ITM2B-201ENST00000378549 ZSWIM5Q9P217 1185 aa20.31■□□□□ 0.84
ITM2B-201ENST00000378549 COL11A1P12107 1806 aaPredicted RBP20.31■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L15C9J2P7 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L13C9JLJ4 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L11C9JVI0 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L18D6R9N7 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L22D6RA61 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L17D6RBQ6 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L19D6RCP7 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L20D6RJB6 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 WDR46O15213 610 aaKnown RBP20.3■□□□□ 0.84
ITM2B-201ENST00000378549 CYP2C8P10632 490 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 MCCP23508 829 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
ITM2B-201ENST00000378549 HSPA4P34932 840 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 USP17L24Q0WX57 530 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 NKX2-3Q8TAU0 364 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 ZSCAN10Q96SZ4 725 aaPredicted RBP20.3■□□□□ 0.84
ITM2B-201ENST00000378549 TANGO6Q9C0B7 1094 aa20.3■□□□□ 0.84
ITM2B-201ENST00000378549 ASCC2Q9H1I8 757 aaPredicted RBP20.3■□□□□ 0.84
ITM2B-201ENST00000378549 RPAP3Q9H6T3 665 aaPredicted RBP20.3■□□□□ 0.84
ITM2B-201ENST00000378549 TNKSO95271 1327 aa20.29■□□□□ 0.84
ITM2B-201ENST00000378549 F5H6K3 240 aa20.29■□□□□ 0.84
ITM2B-201ENST00000378549 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
ITM2B-201ENST00000378549 KLRC3Q07444 240 aa20.29■□□□□ 0.84
ITM2B-201ENST00000378549 KRT32Q14532 448 aa20.29■□□□□ 0.84
ITM2B-201ENST00000378549 SART3Q15020 963 aaKnown RBP20.29■□□□□ 0.84
ITM2B-201ENST00000378549 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
ITM2B-201ENST00000378549 TTC14Q96N46 770 aa20.29■□□□□ 0.84
ITM2B-201ENST00000378549 ERICH2A1L162 156 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 TLR2O60603 784 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 NDUFB10O96000 172 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 HSPA8P11142 646 aaKnown RBP20.28■□□□□ 0.84
ITM2B-201ENST00000378549 NOVP48745 357 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 KIAA1755Q5JYT7 1200 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 DGKHQ86XP1 1220 aa20.28■□□□□ 0.84
ITM2B-201ENST00000378549 A0A0G2JMZ2 1700 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 MCM5P33992 734 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 TSGA10IPQ3SY00 556 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 RCSD1Q6JBY9 416 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 CATSPERGQ6ZRH7 1159 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 MB21D2Q8IYB1 491 aaPredicted RBP20.27■□□□□ 0.84
ITM2B-201ENST00000378549 TMEM47Q9BQJ4 181 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 USP26Q9BXU7 913 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 ISY1Q9ULR0 285 aaKnown RBP20.27■□□□□ 0.84
ITM2B-201ENST00000378549 MYH6P13533 1939 aa20.27■□□□□ 0.84
ITM2B-201ENST00000378549 GPR25O00155 361 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 LBX1P52954 281 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
ITM2B-201ENST00000378549 FAM83BQ5T0W9 1011 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 SLFN13Q68D06 897 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 ENAHQ8N8S7 591 aaPredicted RBP20.26■□□□□ 0.83
ITM2B-201ENST00000378549 GTF3C2Q8WUA4 911 aaPredicted RBP20.26■□□□□ 0.83
ITM2B-201ENST00000378549 R3HDMLQ9H3Y0 253 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 KAT14Q9H8E8 782 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 ADGRA2Q96PE1 1338 aa20.26■□□□□ 0.83
ITM2B-201ENST00000378549 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
ITM2B-201ENST00000378549 FLOT1O75955 427 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 GCLCP48506 637 aaPredicted RBP20.25■□□□□ 0.83
ITM2B-201ENST00000378549 HERVK_113P62684 666 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 C8orf34Q49A92 452 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 IFIT1BQ5T764 474 aaKnown RBP20.25■□□□□ 0.83
ITM2B-201ENST00000378549 CHST3Q7LGC8 479 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 KCNB2Q92953 911 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 NEK1Q96PY6 1258 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 CPA4Q9UI42 421 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
ITM2B-201ENST00000378549 PRC1O43663 620 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 BMP3P12645 472 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 SLC1A4P43007 532 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 GMCL1Q96IK5 515 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 NUP88Q99567 741 aaPredicted RBP20.24■□□□□ 0.83
ITM2B-201ENST00000378549 P2RX7Q99572 595 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms