RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CYLC1P35663 651 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 HLFQ16534 295 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 EPHA10Q5JZY3 1008 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 GBP6Q6ZN66 633 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ZNF804BA4D1E1 1349 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 VGLL3A8MV65 326 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 FERP16591 822 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 KIAA1841Q6NSI8 718 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 DTHD1Q6ZMT9 781 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-205ENST00000377670 BTDP43251 543 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ADCY7P51828 1080 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ICA1Q05084 483 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ANKS4BQ8N8V4 417 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 HAUS7Q99871 368 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 STX10O60499 249 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 SORBS3O60504 671 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 NCAPH2Q6IBW4 605 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 SELENOSQ9BQE4 189 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 ADGRB3O60242 1522 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 CCDC160A6NGH7 325 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 FRMD4BQ9Y2L6 1034 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 AOX1Q06278 1338 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 VWA3AA6NCI4 1184 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 NDC80O14777 642 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 ZNF569Q5MCW4 686 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 USP17L12C9JPN9 530 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 USP17L21D6R901 530 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 GAS8O95995 478 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 IGBP1P78318 339 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 Q3C1V9 767 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 RPS6KC1Q96S38 1066 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 KRT19P08727 400 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 HSPD1P10809 573 aaKnown RBP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 RNASELQ05823 741 aaKnown RBP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 MAEAQ7L5Y9 396 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
HIF3A-205ENST00000377670 ADD3Q9UEY8 706 aaKnown RBP12.04□□□□□ -0.48
HIF3A-205ENST00000377670 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 HAUS2Q9NVX0 235 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 PDE6AP16499 860 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 YARSP54577 528 aaKnown RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 PPM1EQ8WY54 764 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 GPR101Q96P66 508 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 MTIF3Q9H2K0 278 aaKnown RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 KCNG1Q9UIX4 513 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 KCNH4Q9UQ05 1017 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 PSMA7O14818 248 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 HDXQ7Z353 690 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 ZBTB8OSQ8IWT0 167 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 ARPP21Q9UBL0 812 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 FGAP02671 866 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 RPL13P26373 211 aaKnown RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 MXRA7P84157 204 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 NAA25Q14CX7 972 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 FAM76AQ8TAV0 307 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 RIOK1Q9BRS2 568 aaKnown RBP12.03□□□□□ -0.48
HIF3A-205ENST00000377670 IKBKGQ9Y6K9 419 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 SASH1O94885 1247 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 PIK3AP1Q6ZUJ8 805 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 GUCA1BQ9UMX6 200 aa12.03□□□□□ -0.48
HIF3A-205ENST00000377670 PRPF6O94906 941 aaKnown RBP12.02□□□□□ -0.48
HIF3A-205ENST00000377670 EVCP57679 992 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 FAM160B1Q5W0V3 765 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 KRT26Q7Z3Y9 468 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 NSMCE1Q8WV22 266 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 ERO1AQ96HE7 468 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.48
HIF3A-205ENST00000377670 TACC1O75410 805 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms