RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 C12orf60Q5U649 245 aa17.01■□□□□ 0.31
UBL4A-201ENST00000369653 CTR9Q6PD62 1173 aa17.01■□□□□ 0.31
UBL4A-201ENST00000369653 P2RX7Q99572 595 aaKnown RBP17.01■□□□□ 0.31
UBL4A-201ENST00000369653 NAPBQ9H115 298 aa17.01■□□□□ 0.31
UBL4A-201ENST00000369653 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
UBL4A-201ENST00000369653 UNC80Q8N2C7 3258 aa17.01■□□□□ 0.31
UBL4A-201ENST00000369653 ASNSP08243 561 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
UBL4A-201ENST00000369653 TATDN1Q6P1N9 297 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 POTEEQ6S8J3 1075 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
UBL4A-201ENST00000369653 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 IFNL3Q8IZI9 196 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 AS3MTQ9HBK9 375 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 ROBO3Q96MS0 1386 aa17■□□□□ 0.31
UBL4A-201ENST00000369653 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 SHMT1P34896 483 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 BACE1P56817 501 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 HERVK_113P62684 666 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
UBL4A-201ENST00000369653 CERKLQ49MI3 558 aaPredicted RBP16.99■□□□□ 0.31
UBL4A-201ENST00000369653 ZNF589Q86UQ0 364 aaPredicted RBP16.99■□□□□ 0.31
UBL4A-201ENST00000369653 PAGR1Q9BTK6 254 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 PORCNQ9H237 461 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 HMX1Q9NP08 348 aaPredicted RBP16.99■□□□□ 0.31
UBL4A-201ENST00000369653 MORF4L1Q9UBU8 362 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
UBL4A-201ENST00000369653 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
UBL4A-201ENST00000369653 RPTORQ8N122 1335 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 RAD50Q92878 1312 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 PRKAR2AP13861 404 aaKnown RBP16.98■□□□□ 0.31
UBL4A-201ENST00000369653 EVX2Q03828 476 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 CCL14Q16627 93 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 BMP2KLQ5H9B9 411 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 C16orf86Q6ZW13 317 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 SKAP1Q86WV1 359 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 WDR18Q9BV38 432 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 TMOD4Q9NZQ9 345 aa16.98■□□□□ 0.31
UBL4A-201ENST00000369653 PFASO15067 1338 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 MINDY4BA8MYZ0 360 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 ABCB5Q2M3G0 1257 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 Q3C1V9 767 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 SLC44A5Q8NCS7 719 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 GDF15Q99988 308 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 CABP5Q9NP86 173 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 RBPJLQ9UBG7 517 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 ZNFX1Q9P2E3 1918 aaKnown RBP16.97■□□□□ 0.31
UBL4A-201ENST00000369653 EYSQ5T1H1 3165 aa16.97■□□□□ 0.31
UBL4A-201ENST00000369653 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 RLFQ13129 1914 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 FOXP2O15409 715 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 GH2P01242 217 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
UBL4A-201ENST00000369653 CCND3P30281 292 aaPredicted RBP16.96■□□□□ 0.31
UBL4A-201ENST00000369653 ERVK-9P63128 1117 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 ERVK-24P63145 666 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 Q7L0L9 218 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 NBPF3Q9H094 633 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 EMILIN3Q9NT22 766 aa16.96■□□□□ 0.31
UBL4A-201ENST00000369653 PARP14Q460N5 1801 aa16.96■□□□□ 0.3
UBL4A-201ENST00000369653 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 MPHOSPH10O00566 681 aaKnown RBP16.95■□□□□ 0.3
UBL4A-201ENST00000369653 HSPD1P10809 573 aaKnown RBP16.95■□□□□ 0.3
UBL4A-201ENST00000369653 CHMLP26374 656 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 HOXA7P31268 230 aaPredicted RBP16.95■□□□□ 0.3
UBL4A-201ENST00000369653 MAGEA10P43363 369 aaPredicted RBP16.95■□□□□ 0.3
UBL4A-201ENST00000369653 CDK8P49336 464 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 PPARAQ07869 468 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 CACNB2Q08289 660 aaPredicted RBP16.95■□□□□ 0.3
UBL4A-201ENST00000369653 ALX1Q15699 326 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 MAP3K21Q5TCX8 1036 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 ANKLE1Q8NAG6 615 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 GPRC5AQ8NFJ5 357 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 CCDC17Q96LX7 622 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 OGDHLQ9ULD0 1010 aa16.95■□□□□ 0.3
UBL4A-201ENST00000369653 COL11A1P12107 1806 aaPredicted RBP16.95■□□□□ 0.3
UBL4A-201ENST00000369653 A0A1W2PPC1 479 aa16.94■□□□□ 0.3
UBL4A-201ENST00000369653 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
UBL4A-201ENST00000369653 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
UBL4A-201ENST00000369653 TMEM179Q6ZVK1 233 aa16.94■□□□□ 0.3
UBL4A-201ENST00000369653 GPR142Q7Z601 462 aa16.94■□□□□ 0.3
UBL4A-201ENST00000369653 MKNK2Q9HBH9 465 aa16.94■□□□□ 0.3
UBL4A-201ENST00000369653 SMCHD1A6NHR9 2005 aa16.94■□□□□ 0.3
UBL4A-201ENST00000369653 LTBP2Q14767 1821 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 CNMDO75829 334 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 PDE4BQ07343 736 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 SLC17A8Q8NDX2 589 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 SOCS4Q8WXH5 440 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 USP6NLQ92738 828 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 DSCC1Q9BVC3 393 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
UBL4A-201ENST00000369653 FGAP02671 866 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms