RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 CCDC114Q96M63 670 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 CHP1Q99653 195 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 SEC31BQ9NQW1 1179 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 RNF225M0QZC1 329 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 SLC8A3P57103 927 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 NEXNQ0ZGT2 675 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 KRT31Q15323 416 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 C6orf89Q6UWU4 347 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 ZNF572Q7Z3I7 529 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 NLRP14Q86W24 1093 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 MYCBPAPQ8TBZ2 947 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 RNPC3Q96LT9 517 aaKnown RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 SPEF2Q9C093 1822 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 CLSTN1O94985 981 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 FAM107AO95990 144 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 TNFRSF8P28908 595 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 METAP2P50579 478 aaKnown RBP eCLIP20.08■□□□□ 0.81
CHTOP-201ENST00000368686 HERVK_113P62684 666 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 IFFO1Q0D2I5 559 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 IFT88Q13099 833 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 BIRC2Q13490 618 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 CCDC121Q6ZUS5 278 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 TSEN2Q8NCE0 465 aaKnown RBP20.08■□□□□ 0.81
CHTOP-201ENST00000368686 CCT8L2Q96SF2 557 aa20.08■□□□□ 0.81
CHTOP-201ENST00000368686 PIK3C2AO00443 1686 aa20.08■□□□□ 0.8
CHTOP-201ENST00000368686 NEURL1BA8MQ27 555 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 CDC25AP30304 524 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 GRIK3Q13003 919 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 GCKRQ14397 625 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 NOSTRINQ8IVI9 506 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 LMO7Q8WWI1 1683 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 KLHL33A6NCF5 533 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 M0R2C6 588 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-201ENST00000368686 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-201ENST00000368686 HAND2P61296 217 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 GRIN1Q05586 938 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 KIAA1328Q86T90 577 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 FUKQ8N0W3 1084 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 OR8K1Q8NGG5 319 aa20.07■□□□□ 0.8
CHTOP-201ENST00000368686 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
CHTOP-201ENST00000368686 ZNF185O15231 689 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 IDEP14735 1019 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 COPB1P53618 953 aaKnown RBP20.06■□□□□ 0.8
CHTOP-201ENST00000368686 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 RCSD1Q6JBY9 416 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 RIC3Q7Z5B4 369 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 SH2D3CQ8N5H7 860 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 ZIM3Q96PE6 472 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.06■□□□□ 0.8
CHTOP-201ENST00000368686 BCL9LQ86UU0 1499 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 HEG1Q9ULI3 1381 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 PPP1R3GB7ZBB8 358 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 PDHBP11177 359 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 HDLBPQ00341 1268 aaKnown RBP20.06■□□□□ 0.8
CHTOP-201ENST00000368686 GUCY1A3Q02108 690 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 C3orf20Q8ND61 904 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 GSDMAQ96QA5 445 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 JADE2Q9NQC1 790 aa20.06■□□□□ 0.8
CHTOP-201ENST00000368686 DDX21Q9NR30 783 aaKnown RBP eCLIP20.06■□□□□ 0.8
CHTOP-201ENST00000368686 NR1D1P20393 614 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 TBC1D8BQ0IIM8 1120 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 TSR1Q2NL82 804 aaKnown RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 FAM228AQ86W67 206 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 LRRC1Q9BTT6 524 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 DMGDHQ9UI17 866 aaKnown RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 SRPRBQ9Y5M8 271 aaKnown RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 AIMP1Q12904 312 aaKnown RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 RILPL1Q5EBL4 403 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 TAX1BP1Q86VP1 789 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 C1orf131Q8NDD1 294 aaKnown RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 DNAJC7Q99615 494 aa20.05■□□□□ 0.8
CHTOP-201ENST00000368686 ANGEL1Q9UNK9 670 aaKnown RBP20.05■□□□□ 0.8
CHTOP-201ENST00000368686 MDH1P40925 334 aaKnown RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 KCTD16Q68DU8 428 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 MAB21L3Q8N8X9 362 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 HDAC7Q8WUI4 952 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 SCLT1Q96NL6 688 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 VPS16Q9H269 839 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 STIM2Q9P246 746 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 TPX2Q9ULW0 747 aaKnown RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 CEP131Q9UPN4 1083 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 GBP2P32456 591 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 TOB1P50616 345 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 ICA1Q05084 483 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 NAA25Q14CX7 972 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 TTF1Q15361 905 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 RABL6Q3YEC7 729 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 ARMC2Q8NEN0 867 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 PHKBQ93100 1093 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 RSRC1Q96IZ7 334 aaKnown RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 IQSEC3Q9UPP2 1182 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-201ENST00000368686 CTNND2Q9UQB3 1225 aa20.04■□□□□ 0.8
CHTOP-201ENST00000368686 ECM2O94769 699 aaPredicted RBP20.03■□□□□ 0.8
CHTOP-201ENST00000368686 IBSPP21815 317 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms