RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CLEC17AQ6ZS10 378 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 NUP133Q8WUM0 1156 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 ANKS1AQ92625 1134 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-203ENST00000359265 VPS37CA5D8V6 355 aaPredicted RBP16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 TCP10L2B9ZVM9 353 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 CDC27P30260 824 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 FOXP4Q8IVH2 680 aaPredicted RBP16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 FAM151AQ8WW52 585 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 IL17RBQ9NRM6 502 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 RBM28Q9NW13 759 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 MTMR6Q9Y217 621 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 STK36Q9NRP7 1315 aa16.12■□□□□ 0.17
PDLIM5-203ENST00000359265 DDX11L8A8MPP1 907 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 DTNBO60941 627 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 F13A1P00488 732 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 SHMT1P34896 483 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 PPP4R3BQ5MIZ7 849 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 APOBEC3FQ8IUX4 373 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 FANCBQ8NB91 859 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 CTCFLQ8NI51 663 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 GLIS2Q9BZE0 524 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 ORC3Q9UBD5 711 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
PDLIM5-203ENST00000359265 GOLGA6L22H0YM25 854 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 H3BQV1 296 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 IFNAR1P17181 557 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 PTMSP20962 102 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 MCM4P33991 863 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 NBR1Q14596 966 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 USP50Q70EL3 339 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 SH3BP5LQ7L8J4 393 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 MAP3K14Q99558 947 aa16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 FAM217BQ9NTX9 383 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-203ENST00000359265 TRPA1O75762 1119 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 EGFRP00533 1210 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 TOP1P11387 765 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 AKR1B1P15121 316 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 KIF5BP33176 963 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 SSRP1Q08945 709 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 TROAPQ12815 778 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 NOGQ13253 232 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 NTRK3Q16288 839 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 CTU1Q7Z7A3 348 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 TRIM22Q8IYM9 498 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 PNMA1Q8ND90 353 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 WASF1Q92558 559 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 CSRNP1Q96S65 589 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 DNAJC18Q9H819 358 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 RNF186Q9NXI6 227 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 HERC5Q9UII4 1024 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 PITPNM2Q9BZ72 1349 aa16.09■□□□□ 0.17
PDLIM5-203ENST00000359265 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 CEP95Q96GE4 821 aa16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 ZNF408Q9H9D4 720 aa16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 PPP2R3BQ9Y5P8 575 aa16.08■□□□□ 0.16
PDLIM5-203ENST00000359265 IGKV6D-41A0A0C4DH26 115 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 MPHOSPH10O00566 681 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 NOVP48745 357 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 ANGEL2Q5VTE6 544 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 TATDN1Q6P1N9 297 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 HOOK2Q96ED9 719 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 SLC26A6Q9BXS9 759 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 RNF26Q9BY78 433 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 SAGE1Q9NXZ1 904 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 GGA3Q9NZ52 723 aa16.07■□□□□ 0.16
PDLIM5-203ENST00000359265 POLR2AP24928 1970 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 FAM196BA6NMK8 535 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 GNAQP50148 359 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 FOSBP53539 338 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 RASA3Q14644 834 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 GRM4Q14833 912 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 PHKBQ93100 1093 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms