RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 FAM83AQ86UY5 434 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 SLC44A5Q8NCS7 719 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 PHKBQ93100 1093 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 PRMT6Q96LA8 375 aaPredicted RBP15.62■□□□□ 0.09
CCDC197-201ENST00000359253 TMEM47Q9BQJ4 181 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 IGKV6D-41A0A0C4DH26 115 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 NMT2O60551 498 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 EGFRP00533 1210 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 FUT2Q10981 343 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 SLC4A8Q2Y0W8 1093 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 KRT40Q6A162 431 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 FAM151AQ8WW52 585 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 SPATA32Q96LK8 384 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 TDRD3Q9H7E2 651 aaKnown RBP15.61■□□□□ 0.09
CCDC197-201ENST00000359253 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 HERC5Q9UII4 1024 aaKnown RBP15.61■□□□□ 0.09
CCDC197-201ENST00000359253 STX8Q9UNK0 236 aa15.61■□□□□ 0.09
CCDC197-201ENST00000359253 FIBPO43427 364 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 TTLL1O95922 423 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 U2AF2P26368 475 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC197-201ENST00000359253 SHMT1P34896 483 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 KIF23Q02241 960 aaPredicted RBP15.6■□□□□ 0.09
CCDC197-201ENST00000359253 NBPF9Q3BBW0 867 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 TATDN1Q6P1N9 297 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 ZSCAN29Q8IWY8 852 aaPredicted RBP15.6■□□□□ 0.09
CCDC197-201ENST00000359253 FOXP1Q9H334 677 aaPredicted RBP15.6■□□□□ 0.09
CCDC197-201ENST00000359253 RCOR1Q9UKL0 485 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 SYNPO2Q9UMS6 1093 aa15.6■□□□□ 0.09
CCDC197-201ENST00000359253 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 GOLGA6L4A6NEF3 574 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 LETM1O95202 739 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 MMP1P03956 469 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 TNNI2P48788 182 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 GNL2Q13823 731 aaKnown RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 FOXD4L6Q3SYB3 417 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 MAP1SQ66K74 1059 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 FOXD4L3Q6VB84 417 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 SULF1Q8IWU6 871 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 LEO1Q8WVC0 666 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 CEP95Q96GE4 821 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 BRMS1Q9HCU9 246 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 SH3GLB2Q9NR46 395 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 RTEL1Q9NZ71 1219 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 ZNF70Q9UC06 446 aaPredicted RBP15.59■□□□□ 0.09
CCDC197-201ENST00000359253 PASKQ96RG2 1323 aa15.59■□□□□ 0.09
CCDC197-201ENST00000359253 ADAMTSL1Q8N6G6 1762 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 TBC1D12O60347 775 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 DTNBO60941 627 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 YEATS4O95619 227 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 PARP1P09874 1014 aaKnown RBP15.58■□□□□ 0.08
CCDC197-201ENST00000359253 GUCY1B3Q02153 619 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 CERKLQ49MI3 558 aaPredicted RBP15.58■□□□□ 0.08
CCDC197-201ENST00000359253 ASPRV1Q53RT3 343 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 APOBEC3FQ8IUX4 373 aaKnown RBP15.58■□□□□ 0.08
CCDC197-201ENST00000359253 SRBD1Q8N5C6 995 aaKnown RBP15.58■□□□□ 0.08
CCDC197-201ENST00000359253 GPT2Q8TD30 523 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 MKL1Q969V6 931 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 SPZ1Q9BXG8 430 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 KANSL2Q9H9L4 492 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 POLR3EQ9NVU0 708 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 V9GY48 417 aaPredicted RBP15.58■□□□□ 0.08
CCDC197-201ENST00000359253 CNTNAP5Q8WYK1 1306 aa15.58■□□□□ 0.08
CCDC197-201ENST00000359253 DDTLA6NHG4 134 aaPredicted RBP15.57■□□□□ 0.08
CCDC197-201ENST00000359253 AKR1B1P15121 316 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 HSPA6P17066 643 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 APLP1P51693 650 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 TCP10Q12799 353 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 TNFAIP1Q13829 316 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 PFKFB3Q16875 520 aaPredicted RBP15.57■□□□□ 0.08
CCDC197-201ENST00000359253 ANGEL2Q5VTE6 544 aaKnown RBP15.57■□□□□ 0.08
CCDC197-201ENST00000359253 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 GALNT17Q6IS24 598 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 TMEM179Q6ZVK1 233 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 SH3BP5LQ7L8J4 393 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 KRT26Q7Z3Y9 468 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 KCNG4Q8TDN1 519 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC197-201ENST00000359253 GDPD2Q9HCC8 539 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 NYAP2Q9P242 653 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 MAD2L2Q9UI95 211 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 PPP2R3BQ9Y5P8 575 aa15.57■□□□□ 0.08
CCDC197-201ENST00000359253 hCG_1984214I3L0E3 225 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 PLEKHA8P1O95397 391 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 SCG2P13521 617 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 CALML3P27482 149 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 PKN1Q16512 942 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 GPATCH4Q5T3I0 446 aaKnown RBP15.56■□□□□ 0.08
CCDC197-201ENST00000359253 ZFPM1Q8IX07 1006 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 ZNF713Q8N859 430 aaPredicted RBP15.56■□□□□ 0.08
CCDC197-201ENST00000359253 CABP5Q9NP86 173 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 GGA3Q9NZ52 723 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 TFIP11Q9UBB9 837 aaKnown RBP15.56■□□□□ 0.08
CCDC197-201ENST00000359253 PCDHAC2Q9Y5I4 1007 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 MYH8P13535 1937 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 TCHHQ07283 1943 aa15.56■□□□□ 0.08
CCDC197-201ENST00000359253 PPFIA3O75145 1194 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 SNHG28P0DPA3 235 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
CCDC197-201ENST00000359253 FOSBP53539 338 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms