RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 CDKAL1Q5VV42 579 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 FAM84BQ96KN1 310 aaPredicted RBP20.22■□□□□ 0.83
CDK11A-204ENST00000358779 PANX2Q96RD6 677 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 DESI2Q9BSY9 194 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 ARGLU1Q9NWB6 273 aaPredicted RBP20.22■□□□□ 0.83
CDK11A-204ENST00000358779 MINPP1Q9UNW1 487 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 MAST2Q6P0Q8 1798 aa20.21■□□□□ 0.83
CDK11A-204ENST00000358779 KIAA1551Q9HCM1 1747 aa20.21■□□□□ 0.83
CDK11A-204ENST00000358779 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
CDK11A-204ENST00000358779 USP17L21D6R901 530 aa20.21■□□□□ 0.83
CDK11A-204ENST00000358779 SMYD4Q8IYR2 804 aaPredicted RBP20.21■□□□□ 0.83
CDK11A-204ENST00000358779 CTCFLQ8NI51 663 aaPredicted RBP20.21■□□□□ 0.83
CDK11A-204ENST00000358779 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
CDK11A-204ENST00000358779 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
CDK11A-204ENST00000358779 ORC4O43929 436 aa20.2■□□□□ 0.82
CDK11A-204ENST00000358779 MAP3K9P80192 1104 aa20.2■□□□□ 0.82
CDK11A-204ENST00000358779 EVX2Q03828 476 aa20.2■□□□□ 0.82
CDK11A-204ENST00000358779 PTGDRQ13258 359 aa20.2■□□□□ 0.82
CDK11A-204ENST00000358779 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
CDK11A-204ENST00000358779 SRBD1Q8N5C6 995 aaKnown RBP20.2■□□□□ 0.82
CDK11A-204ENST00000358779 ADD3Q9UEY8 706 aaKnown RBP20.2■□□□□ 0.82
CDK11A-204ENST00000358779 THRAP3Q9Y2W1 955 aaKnown RBP20.2■□□□□ 0.82
CDK11A-204ENST00000358779 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.82
CDK11A-204ENST00000358779 PPP1R3GB7ZBB8 358 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 SEMA3EO15041 775 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 TPM1P09493 284 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 PBX1P40424 430 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 MTF1Q14872 753 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 ZNF771Q7L3S4 317 aaPredicted RBP20.19■□□□□ 0.82
CDK11A-204ENST00000358779 PPFIBP1Q86W92 1011 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 IGSF22Q8N9C0 903 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 NSUN4Q96CB9 384 aaKnown RBP20.19■□□□□ 0.82
CDK11A-204ENST00000358779 CTAGE1Q96RT6 745 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 MRFAP1Q9Y605 127 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 SOWAHDA6NJG2 315 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 NMT2O60551 498 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 KARSQ15046 597 aaKnown RBP20.19■□□□□ 0.82
CDK11A-204ENST00000358779 XDHP47989 1333 aa20.19■□□□□ 0.82
CDK11A-204ENST00000358779 CCDC175P0C221 793 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 RBL2Q08999 1139 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 CELF1Q92879 486 aaKnown RBP20.18■□□□□ 0.82
CDK11A-204ENST00000358779 NAA15Q9BXJ9 866 aaKnown RBP20.18■□□□□ 0.82
CDK11A-204ENST00000358779 MRPL44Q9H9J2 332 aaKnown RBP20.18■□□□□ 0.82
CDK11A-204ENST00000358779 CTNND2Q9UQB3 1225 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 PNMA6AP0CW24 399 aaPredicted RBP20.18■□□□□ 0.82
CDK11A-204ENST00000358779 SCG2P13521 617 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 MECOMQ03112 1051 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 TERF2Q15554 542 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 E2F4Q16254 413 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 TMCO3Q6UWJ1 677 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 FBXO33Q7Z6M2 555 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
CDK11A-204ENST00000358779 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
CDK11A-204ENST00000358779 ZRANB2O95218 330 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDK11A-204ENST00000358779 KLRK1P26718 216 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 PPP2R3AQ06190 1150 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 FILIP1LQ4L180 1135 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 STAMQ92783 540 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
CDK11A-204ENST00000358779 DCP1AQ9NPI6 582 aaPredicted RBP20.17■□□□□ 0.82
CDK11A-204ENST00000358779 TRAPPC10P48553 1259 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 NLRP5P59047 1200 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 IQUBQ8NA54 791 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 ST7Q9NRC1 585 aa20.17■□□□□ 0.82
CDK11A-204ENST00000358779 MFAP3LO75121 409 aa20.16■□□□□ 0.82
CDK11A-204ENST00000358779 RAD9BQ6WBX8 426 aa20.16■□□□□ 0.82
CDK11A-204ENST00000358779 SMARCC1Q92922 1105 aaPredicted RBP20.16■□□□□ 0.82
CDK11A-204ENST00000358779 MYH8P13535 1937 aa20.16■□□□□ 0.82
CDK11A-204ENST00000358779 PFKFB3Q16875 520 aaPredicted RBP20.16■□□□□ 0.82
CDK11A-204ENST00000358779 PDXDC2PQ6P474 469 aa20.16■□□□□ 0.82
CDK11A-204ENST00000358779 CPLX3Q8WVH0 158 aa20.16■□□□□ 0.82
CDK11A-204ENST00000358779 BLZF1Q9H2G9 400 aa20.16■□□□□ 0.82
CDK11A-204ENST00000358779 PDS5AQ29RF7 1337 aaKnown RBP20.16■□□□□ 0.82
CDK11A-204ENST00000358779 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
CDK11A-204ENST00000358779 CYP2D6P10635 497 aa20.15■□□□□ 0.82
CDK11A-204ENST00000358779 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
CDK11A-204ENST00000358779 PYM1Q9BRP8 204 aaKnown RBP20.15■□□□□ 0.82
CDK11A-204ENST00000358779 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
CDK11A-204ENST00000358779 ARPP21Q9UBL0 812 aaPredicted RBP20.15■□□□□ 0.82
CDK11A-204ENST00000358779 ADGRG1Q9Y653 693 aa20.15■□□□□ 0.82
CDK11A-204ENST00000358779 MCM7P33993 719 aa20.15■□□□□ 0.82
CDK11A-204ENST00000358779 ITIH6Q6UXX5 1313 aa20.15■□□□□ 0.82
CDK11A-204ENST00000358779 GTPBP6O43824 516 aaPredicted RBP20.14■□□□□ 0.82
CDK11A-204ENST00000358779 TEX35Q5T0J7 233 aa20.14■□□□□ 0.82
CDK11A-204ENST00000358779 RRAGBQ5VZM2 374 aa20.14■□□□□ 0.82
CDK11A-204ENST00000358779 BICDL1Q6ZP65 573 aa20.14■□□□□ 0.82
CDK11A-204ENST00000358779 RSRC2Q7L4I2 434 aaKnown RBP20.14■□□□□ 0.82
CDK11A-204ENST00000358779 ADAMTS3O15072 1205 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 ADAMTS2O95450 1211 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
CDK11A-204ENST00000358779 CASP14P31944 242 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 IL17AQ16552 155 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 CNGA4Q8IV77 575 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 GPR161Q8N6U8 529 aaKnown RBP20.14■□□□□ 0.81
CDK11A-204ENST00000358779 LINC00116Q8NCU8 138 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 LZTFL1Q9NQ48 299 aa20.14■□□□□ 0.81
CDK11A-204ENST00000358779 TSPY2A6NKD2 308 aa20.13■□□□□ 0.81
CDK11A-204ENST00000358779 COBLO75128 1261 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms