RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TSPY2A6NKD2 308 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 PES1O00541 588 aaKnown RBP23.22■■□□□ 1.31
COL13A1-202ENST00000357811 KIF20AO95235 890 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 TXNRD3Q86VQ6 643 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 RGS22Q8NE09 1264 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 PNMA6AP0CW24 399 aaPredicted RBP23.22■■□□□ 1.31
COL13A1-202ENST00000357811 PDE4CQ08493 712 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 TMCO3Q6UWJ1 677 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 TMTC3Q6ZXV5 915 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 PTF1AQ7RTS3 328 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 PUF60Q9UHX1 559 aaKnown RBP23.22■■□□□ 1.31
COL13A1-202ENST00000357811 A0A1B0GTH6 734 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 PPP2R3AQ06190 1150 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 TERF2Q15554 542 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 SPATA1Q5VX52 437 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 APTXQ7Z2E3 356 aaKnown RBP23.21■■□□□ 1.31
COL13A1-202ENST00000357811 SPATA20Q8TB22 786 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 CCDC34Q96HJ3 373 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 USP17L8P0C7I0 530 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 IL17AQ16552 155 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 XDHP47989 1333 aa23.21■■□□□ 1.31
COL13A1-202ENST00000357811 MYH14Q7Z406 1995 aaKnown RBP23.2■■□□□ 1.31
COL13A1-202ENST00000357811 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 FXR1P51114 621 aaKnown RBP eCLIP23.2■■□□□ 1.3
COL13A1-202ENST00000357811 TRIML1Q8N9V2 468 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 RASSF8Q8NHQ8 419 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 TAB2Q9NYJ8 693 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
COL13A1-202ENST00000357811 ZNF804BA4D1E1 1349 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 PP2D1A8MPX8 630 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 BMS1Q14692 1282 aaKnown RBP23.2■■□□□ 1.3
COL13A1-202ENST00000357811 ACRBPQ8NEB7 543 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 DYNLL2Q96FJ2 89 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 MTRQ99707 1265 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 DCP1AQ9NPI6 582 aaPredicted RBP23.2■■□□□ 1.3
COL13A1-202ENST00000357811 MCM9Q9NXL9 1143 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 ANAPC4Q9UJX5 808 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 MYH6P13533 1939 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 NID2Q14112 1375 aa23.2■■□□□ 1.3
COL13A1-202ENST00000357811 NSUN4Q96CB9 384 aaKnown RBP23.19■■□□□ 1.3
COL13A1-202ENST00000357811 CPVLQ9H3G5 476 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 GDAQ9Y2T3 454 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 CNTNAP5Q8WYK1 1306 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 RNF225M0QZC1 329 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-202ENST00000357811 ERCC5P28715 1186 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-202ENST00000357811 TBC1D9BQ66K14 1250 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 RASGRP2Q7LDG7 609 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 N4BP3O15049 544 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 STAG2Q8N3U4 1231 aa23.19■■□□□ 1.3
COL13A1-202ENST00000357811 ZCCHC17Q9NP64 241 aaKnown RBP23.19■■□□□ 1.3
COL13A1-202ENST00000357811 ADD3Q9UEY8 706 aaKnown RBP23.19■■□□□ 1.3
COL13A1-202ENST00000357811 ZNF652Q9Y2D9 606 aa23.18■■□□□ 1.3
COL13A1-202ENST00000357811 CCDC175P0C221 793 aa23.18■■□□□ 1.3
COL13A1-202ENST00000357811 UBE4AQ14139 1066 aa23.18■■□□□ 1.3
COL13A1-202ENST00000357811 KIFC2Q96AC6 838 aa23.18■■□□□ 1.3
COL13A1-202ENST00000357811 BSDC1Q9NW68 430 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-202ENST00000357811 CICQ96RK0 1608 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-202ENST00000357811 SCG2P13521 617 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 LINC00116Q8NCU8 138 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 LRP5O75197 1615 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 MYO1BO43795 1136 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 PLA2G4AP47712 749 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 GABPB1Q06547 395 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-202ENST00000357811 ZNF569Q5MCW4 686 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 FCHSD1Q86WN1 690 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 TNFRSF25Q93038 417 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 GPR101Q96P66 508 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-202ENST00000357811 BRIP1Q9BX63 1249 aa23.17■■□□□ 1.3
COL13A1-202ENST00000357811 ARGLU1Q9NWB6 273 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-202ENST00000357811 TRIM49BA6NDI0 452 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 EFCAB8A8MWE9 144 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 MAP3K9P80192 1104 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 SH3RF1Q7Z6J0 888 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 ELOA2Q8IYF1 753 aaPredicted RBP23.16■■□□□ 1.3
COL13A1-202ENST00000357811 FERMT2Q96AC1 680 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 RBM28Q9NW13 759 aaKnown RBP23.16■■□□□ 1.3
COL13A1-202ENST00000357811 MRFAP1Q9Y605 127 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 DOCK2Q92608 1830 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 FAM205AQ6ZU69 1335 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 GYPCP04921 128 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 KRT31Q15323 416 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 SLC44A5Q8NCS7 719 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 ADGRG1Q9Y653 693 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 FILIP1LQ4L180 1135 aa23.16■■□□□ 1.3
COL13A1-202ENST00000357811 USP17L3A6NCW0 530 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 USP17L4A6NCW7 530 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 ATP2C1P98194 919 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-202ENST00000357811 TFAP4Q01664 338 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 USP17L1Q7RTZ2 530 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 IQUBQ8NA54 791 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 NUP88Q99567 741 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-202ENST00000357811 MYH13Q9UKX3 1938 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 SASH3O75995 380 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 TUBB4AP04350 444 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 GOLGA8HP0CJ92 632 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 HIBADHP31937 336 aaKnown RBP23.15■■□□□ 1.3
COL13A1-202ENST00000357811 GSDMAQ96QA5 445 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
COL13A1-202ENST00000357811 CRNKL1Q9BZJ0 848 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms