RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SPDL1Q96EA4 605 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 IFIH1Q9BYX4 1025 aaKnown RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 FAM114A2Q9NRY5 505 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 NOC2LQ9Y3T9 749 aaKnown RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 MLECQ14165 292 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 CNNM4Q6P4Q7 775 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC197Q8NCU1 140 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 TSC22D3Q99576 134 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 RIMS1Q86UR5 1692 aaKnown RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 DEXIO95424 95 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 POLR3DP05423 398 aaPredicted RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 POTEJP0CG39 1038 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 HMGB2P26583 209 aaKnown RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 LRRC31Q6UY01 552 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 AFAP1Q8N556 730 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 GLT8D2Q9H1C3 349 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 ATP6V0A4Q9HBG4 840 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 CTTNBP2NLQ9P2B4 639 aa7.3□□□□□ -1.24
TRIM38-201ENST00000357085 ANGEL1Q9UNK9 670 aaKnown RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 UTP11Q9Y3A2 253 aaKnown RBP7.3□□□□□ -1.24
TRIM38-201ENST00000357085 MEFVO15553 781 aaPredicted RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CREB3O43889 395 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GSTA2P09210 222 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC93Q567U6 631 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 PPP4R3AQ6IN85 833 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 STXBP4Q6ZWJ1 553 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CFAP61Q8NHU2 1237 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 PPCSQ9HAB8 311 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GPR108Q9NPR9 543 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 AFDNP55196 1824 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 TNFRSF8P28908 595 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GGCXP38435 758 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GNAQP50148 359 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 PAK1Q13153 545 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 IQCB1Q15051 598 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 SPATA1Q5VX52 437 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 SREK1Q8WXA9 508 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC28BQ9BUN5 200 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CEP126Q9P2H0 1117 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 DIS3Q9Y2L1 958 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 ZMYM6O95789 1325 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 ANKRD65E5RJM6 399 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 H3BQF6 201 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 FSBPO95073 299 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 SMTNP53814 917 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 TMED1Q13445 227 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 DPCR1Q3MIW9 517 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GALNT17Q6IS24 598 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 EIF1ADQ8N9N8 165 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 OLFM3Q96PB7 478 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 LZTS2Q9BRK4 669 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 ADKP55263 362 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CCT2P78371 535 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC65Q8IXS2 484 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 OR8K1Q8NGG5 319 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 SPAG5Q96R06 1193 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 WDR24Q96S15 920 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 DNM2P50570 870 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 ZNF131P52739 623 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 NAIF1Q69YI7 327 aaPredicted RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 MCM10Q7L590 875 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 APBB1IPQ7Z5R6 666 aaPredicted RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 EPN3Q9H201 632 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 BTBD11A6QL63 1104 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 HSP90AA4PQ58FG1 418 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 TOGARAM2Q6ZUX3 1019 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 C1orf131Q8NDD1 294 aaKnown RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 Q9H521 79 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GOLGA8AA7E2F4 631 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GSCP56915 257 aaPredicted RBP7.29□□□□□ -1.24
TRIM38-201ENST00000357085 EP400NLQ6ZTU2 488 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 TCEANC2Q96MN5 208 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 PAG1Q9NWQ8 432 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 TPCN1Q9ULQ1 816 aa7.29□□□□□ -1.24
TRIM38-201ENST00000357085 GRM8O00222 908 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 ZBTB43O43298 467 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 GUCY1B3Q02153 619 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 SEPT14Q6ZU15 432 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 RSRC2Q7L4I2 434 aaKnown RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 STMN2Q93045 179 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 NUDT16Q96DE0 195 aaKnown RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 H7C1D1 291 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 PSMD14O00487 310 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 RAB11FIP4Q86YS3 637 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 UBL4BQ8N7F7 174 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 RWDD2AQ9UIY3 292 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 PCDHA7Q9UN72 937 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 VTI1AQ96AJ9 217 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 RMDN2Q96LZ7 410 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 CIB2O75838 187 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 EPB41P11171 864 aaKnown RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 E2F5Q15329 346 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 ZNF530Q6P9A1 599 aaPredicted RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 CENPKQ9BS16 269 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 GSTA1P08263 222 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 PFKFB1P16118 471 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms