RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 VCPKMTQ9H867 229 aa18.8■□□□□ 0.6
FDPS-201ENST00000356657 WBP1LQ9NX94 342 aa18.8■□□□□ 0.6
FDPS-201ENST00000356657 TAF6LQ9Y6J9 622 aa18.8■□□□□ 0.6
FDPS-201ENST00000356657 FOXN1O15353 648 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 HMGCS2P54868 508 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 KIF23Q02241 960 aaPredicted RBP18.79■□□□□ 0.6
FDPS-201ENST00000356657 MKRN3Q13064 507 aaKnown RBP18.79■□□□□ 0.6
FDPS-201ENST00000356657 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
FDPS-201ENST00000356657 ANKRD23Q86SG2 305 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 CCDC84Q86UT8 332 aaPredicted RBP18.79■□□□□ 0.6
FDPS-201ENST00000356657 SIAH1Q8IUQ4 282 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 CLIP2Q9UDT6 1046 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 AGTPBP1Q9UPW5 1226 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 TNKSO95271 1327 aa18.79■□□□□ 0.6
FDPS-201ENST00000356657 A0A1W2PRG0 241 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 SEC24BO95487 1268 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 ATP2B2Q01814 1243 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 BLOC1S2Q6QNY1 142 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 ACER1Q8TDN7 264 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 BRI3BPQ8WY22 251 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 ZIC5Q96T25 663 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
FDPS-201ENST00000356657 WDR46O15213 610 aaKnown RBP18.77■□□□□ 0.6
FDPS-201ENST00000356657 CA12O43570 354 aa18.77■□□□□ 0.6
FDPS-201ENST00000356657 PRC1O43663 620 aa18.77■□□□□ 0.6
FDPS-201ENST00000356657 LIFRP42702 1097 aa18.77■□□□□ 0.6
FDPS-201ENST00000356657 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
FDPS-201ENST00000356657 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
FDPS-201ENST00000356657 RCSD1Q6JBY9 416 aa18.77■□□□□ 0.6
FDPS-201ENST00000356657 FBXL16Q8N461 479 aa18.77■□□□□ 0.6
FDPS-201ENST00000356657 ENAHQ8N8S7 591 aaPredicted RBP18.77■□□□□ 0.6
FDPS-201ENST00000356657 JAKMIP1Q96N16 626 aaKnown RBP18.77■□□□□ 0.6
FDPS-201ENST00000356657 IFIT3O14879 490 aaKnown RBP18.77■□□□□ 0.59
FDPS-201ENST00000356657 NMT2O60551 498 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 HOXA7P31268 230 aaPredicted RBP18.77■□□□□ 0.59
FDPS-201ENST00000356657 RBM25P49756 843 aaKnown RBP18.77■□□□□ 0.59
FDPS-201ENST00000356657 MOGSQ13724 837 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 SEC23AQ15436 765 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 ADCK5Q3MIX3 580 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 IFNL1Q8IU54 200 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 CLEC10AQ8IUN9 316 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 GMCL1Q96IK5 515 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 KAT14Q9H8E8 782 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.59
FDPS-201ENST00000356657 VCAM1P19320 739 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 ANTXR2P58335 489 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 WTAPQ15007 396 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 GADL1Q6ZQY3 521 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 GTF3C2Q8WUA4 911 aaPredicted RBP18.76■□□□□ 0.59
FDPS-201ENST00000356657 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 CFHR5Q9BXR6 569 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 C22orf23Q9BZE7 217 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 ZSWIM6Q9HCJ5 1215 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 SAGE1Q9NXZ1 904 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 CYP46A1Q9Y6A2 500 aa18.76■□□□□ 0.59
FDPS-201ENST00000356657 F5H6K3 240 aa18.75■□□□□ 0.59
FDPS-201ENST00000356657 CASTP20810 708 aaKnown RBP18.75■□□□□ 0.59
FDPS-201ENST00000356657 EXOSC10Q01780 885 aaKnown RBP18.75■□□□□ 0.59
FDPS-201ENST00000356657 KLRC3Q07444 240 aa18.75■□□□□ 0.59
FDPS-201ENST00000356657 IGDCC4Q8TDY8 1250 aa18.75■□□□□ 0.59
FDPS-201ENST00000356657 PARK7Q99497 189 aaKnown RBP18.75■□□□□ 0.59
FDPS-201ENST00000356657 TSKSQ9UJT2 592 aa18.75■□□□□ 0.59
FDPS-201ENST00000356657 MYPNQ86TC9 1320 aa18.75■□□□□ 0.59
FDPS-201ENST00000356657 USP17L15C9J2P7 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 BTBD19C9JJ37 291 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L13C9JLJ4 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L11C9JVI0 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L18D6R9N7 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L22D6RA61 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L17D6RBQ6 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L19D6RCP7 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L20D6RJB6 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 LBX1P52954 281 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 USP17L24Q0WX57 530 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 SGMS1Q86VZ5 419 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
FDPS-201ENST00000356657 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
FDPS-201ENST00000356657 PARP14Q460N5 1801 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 SH2B2O14492 632 aaPredicted RBP18.73■□□□□ 0.59
FDPS-201ENST00000356657 NDUFB10O96000 172 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 OSBPP22059 807 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 RCAN1P53805 252 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 ZYXQ15942 572 aaKnown RBP18.73■□□□□ 0.59
FDPS-201ENST00000356657 GPATCH4Q5T3I0 446 aaKnown RBP18.73■□□□□ 0.59
FDPS-201ENST00000356657 GPAT2Q6NUI2 795 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 MAP3K14Q99558 947 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 PTPN18Q99952 460 aa18.73■□□□□ 0.59
FDPS-201ENST00000356657 PDHXO00330 501 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 IGF2BP3O00425 579 aaKnown RBP eCLIP18.72■□□□□ 0.59
FDPS-201ENST00000356657 PLA2G6O60733 806 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 SLC1A4P43007 532 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
FDPS-201ENST00000356657 FGD1P98174 961 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms