RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TM4SF4P48230 202 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 OTUD7BQ6GQQ9 843 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 TMTC2Q8N394 836 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.51
TRIM13-201ENST00000356017 IL17RAQ96F46 866 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 C12orf42Q96LP6 360 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
TRIM13-201ENST00000356017 ANTXR2P58335 489 aa18.26■□□□□ 0.51
TRIM13-201ENST00000356017 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
TRIM13-201ENST00000356017 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
TRIM13-201ENST00000356017 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
TRIM13-201ENST00000356017 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
TRIM13-201ENST00000356017 DNAJC5GQ8N7S2 189 aa18.26■□□□□ 0.51
TRIM13-201ENST00000356017 VCPKMTQ9H867 229 aa18.26■□□□□ 0.51
TRIM13-201ENST00000356017 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
TRIM13-201ENST00000356017 RBM25P49756 843 aaKnown RBP18.25■□□□□ 0.51
TRIM13-201ENST00000356017 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
TRIM13-201ENST00000356017 TMEM67Q5HYA8 995 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 GADL1Q6ZQY3 521 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 GMCL1P1Q8NEA9 526 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 PHIPQ8WWQ0 1821 aa18.25■□□□□ 0.51
TRIM13-201ENST00000356017 F5H6K3 240 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 KLRC3Q07444 240 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIM13-201ENST00000356017 WTAPQ15007 396 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 SEC23AQ15436 765 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 ANKRD23Q86SG2 305 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 IGDCC4Q8TDY8 1250 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 ZIC5Q96T25 663 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 ZCCHC17Q9NP64 241 aaKnown RBP18.24■□□□□ 0.51
TRIM13-201ENST00000356017 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 SLC45A1Q9Y2W3 748 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 CYP46A1Q9Y6A2 500 aa18.24■□□□□ 0.51
TRIM13-201ENST00000356017 ALDH1A1P00352 501 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 LIFRP42702 1097 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 MOGSQ13724 837 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 IFNL1Q8IU54 200 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 LRRC47Q8N1G4 583 aaKnown RBP18.23■□□□□ 0.51
TRIM13-201ENST00000356017 RAD21O60216 631 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 VCAM1P19320 739 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 FGD1P98174 961 aa18.23■□□□□ 0.51
TRIM13-201ENST00000356017 MAP2K1Q02750 393 aaPredicted RBP18.23■□□□□ 0.51
TRIM13-201ENST00000356017 BTBD19C9JJ37 291 aa18.22■□□□□ 0.51
TRIM13-201ENST00000356017 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
TRIM13-201ENST00000356017 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
TRIM13-201ENST00000356017 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
TRIM13-201ENST00000356017 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
TRIM13-201ENST00000356017 SPICE1Q8N0Z3 855 aa18.22■□□□□ 0.51
TRIM13-201ENST00000356017 FBXL16Q8N461 479 aa18.22■□□□□ 0.51
TRIM13-201ENST00000356017 PNMA1Q8ND90 353 aa18.22■□□□□ 0.51
TRIM13-201ENST00000356017 PTPN18Q99952 460 aa18.22■□□□□ 0.51
TRIM13-201ENST00000356017 NDUFB10O96000 172 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 DGKZQ13574 1117 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
TRIM13-201ENST00000356017 GPAT2Q6NUI2 795 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 TBC1D32Q96NH3 1257 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 LY9Q9HBG7 655 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 PNMA3Q9UL41 463 aa18.21■□□□□ 0.51
TRIM13-201ENST00000356017 CCDC69A6NI79 296 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 PDHXO00330 501 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRIM13-201ENST00000356017 CPA1P15085 419 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 SLC1A4P43007 532 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 TREML2Q5T2D2 321 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 NFXL1Q6ZNB6 911 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 CATIPQ7Z7H3 387 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
TRIM13-201ENST00000356017 OSBPP22059 807 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 SGMS1Q86VZ5 419 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 TCEANC2Q96MN5 208 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 BEGAINQ9BUH8 593 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 LRRC2Q9BYS8 371 aa18.2■□□□□ 0.5
TRIM13-201ENST00000356017 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
TRIM13-201ENST00000356017 THSD7BQ9C0I4 1608 aa18.19■□□□□ 0.5
TRIM13-201ENST00000356017 BMP3P12645 472 aa18.19■□□□□ 0.5
TRIM13-201ENST00000356017 IRX3P78415 501 aaPredicted RBP18.19■□□□□ 0.5
TRIM13-201ENST00000356017 SYNE3Q6ZMZ3 975 aa18.19■□□□□ 0.5
TRIM13-201ENST00000356017 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
TRIM13-201ENST00000356017 Q6ZUG5 572 aa18.19■□□□□ 0.5
TRIM13-201ENST00000356017 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms