RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 APBA2Q99767 749 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 MYD88Q99836 296 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 ANAPC5Q9UJX4 755 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 CCDC61Q9Y6R9 512 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 CTNND1O60716 968 aaKnown RBP6.73□□□□□ -1.33
RFC1-201ENST00000349703 RASSF9O75901 435 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 CCDC192P0DO97 292 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.73□□□□□ -1.33
RFC1-201ENST00000349703 SNX29Q8TEQ0 813 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 BHMTQ93088 406 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
RFC1-201ENST00000349703 PPT2Q9UMR5 302 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 PAXBP1Q9Y5B6 917 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 KCNJ4P48050 445 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 CDR1P51861 262 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 HNRNPMP52272 730 aaKnown RBP eCLIP6.73□□□□□ -1.33
RFC1-201ENST00000349703 ALDH1L2Q3SY69 923 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 KRBA2Q6ZNG9 492 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 SMARCE1Q969G3 411 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 KDM5DQ9BY66 1539 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 A0A087WZG4 1122 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KATNA1O75449 491 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 GMNNO75496 209 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 GEMIN4P57678 1058 aaKnown RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KRT39Q6A163 491 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 CHRDL2Q6WN34 429 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KRT28Q7Z3Y7 464 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 PHACTR3Q96KR7 559 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KCNJ15Q99712 375 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KATNAL1Q9BW62 490 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 ZWILCHQ9H900 591 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KIF9Q9HAQ2 790 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 NAP1L2Q9ULW6 460 aaPredicted RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 EID1Q9Y6B2 187 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 POLR3AO14802 1390 aaPredicted RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 PDPK1O15530 556 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 FGFR1P11362 822 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 RIPK4P57078 832 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 HYAL2Q12891 473 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 P3H2Q8IVL5 708 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 NIM1KQ8IY84 436 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KRT222Q8N1A0 295 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 AOPEPQ8N6M6 819 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 LGR6Q9HBX8 967 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 SCAF11Q99590 1463 aaKnown RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 WDR62O43379 1518 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 CFAP69A5D8W1 941 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 CCP110O43303 1012 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 URI1O94763 535 aaPredicted RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 RHOQP17081 205 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 ALFQ53S48 1182 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 TBC1D31Q96DN5 1066 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 DDX23Q9BUQ8 820 aaKnown RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 DACH1Q9UI36 760 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 DENND4BO75064 1496 aaPredicted RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 GSTA4O15217 222 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 MAP3K12Q12852 859 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 PAN2Q504Q3 1202 aaKnown RBP6.72□□□□□ -1.33
RFC1-201ENST00000349703 GAS2L3Q86XJ1 694 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 LRRC43Q8N309 656 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 USP20Q9Y2K6 914 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 KIAA0586Q9BVV6 1533 aa6.72□□□□□ -1.33
RFC1-201ENST00000349703 CFAP99D6REC4 459 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 APBA1Q02410 837 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.33
RFC1-201ENST00000349703 SLC14A2Q15849 920 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 CAMK4Q16566 473 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 PREPLQ4J6C6 727 aaPredicted RBP6.71□□□□□ -1.33
RFC1-201ENST00000349703 MEI1Q5TIA1 1274 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 ELMSAN1Q6PJG2 1045 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 FBF1Q8TES7 1133 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 BAP1Q92560 729 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 DHRS1Q96LJ7 313 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 FAM184BQ9ULE4 1060 aa6.71□□□□□ -1.33
RFC1-201ENST00000349703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.71□□□□□ -1.33
RFC1-201ENST00000349703 ZC3H4Q9UPT8 1303 aaKnown RBP6.71□□□□□ -1.33
RFC1-201ENST00000349703 ESYT3A0FGR9 886 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 CTCFP49711 727 aaPredicted RBP6.71□□□□□ -1.34
RFC1-201ENST00000349703 G3BP1Q13283 466 aaKnown RBP eCLIP6.71□□□□□ -1.342e-11■■■■□ 21.6
RFC1-201ENST00000349703 KRT40Q6A162 431 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 TTLL5Q6EMB2 1281 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 FAM186BQ8IYM0 893 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 C2orf69Q8N8R5 385 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 IPO4Q8TEX9 1081 aaKnown RBP6.71□□□□□ -1.34
RFC1-201ENST00000349703 CSRNP1Q96S65 589 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
RFC1-201ENST00000349703 SEPHS1P49903 392 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 RAPH1Q70E73 1250 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 CTCFLQ8NI51 663 aaPredicted RBP6.71□□□□□ -1.34
RFC1-201ENST00000349703 CENPTQ96BT3 561 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 KCTD12Q96CX2 325 aaKnown RBP6.71□□□□□ -1.34
RFC1-201ENST00000349703 STAMBPL1Q96FJ0 436 aa6.71□□□□□ -1.34
RFC1-201ENST00000349703 MAP3K14Q99558 947 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms