RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TRIM42Q8IWZ5 723 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 ZNF496Q96IT1 587 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 GUCA1BQ9UMX6 200 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 A0A1W2PRG0 241 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 B4DLN1 442 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 MRPL12P52815 198 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 MUM1L1Q5H9M0 696 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 ARL1P40616 181 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 PLCB3Q01970 1234 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 TROVE2P10155 538 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 ZAP70P43403 619 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 BRAPQ7Z569 592 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 ARHGAP18Q8N392 663 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 TSNARE1Q96NA8 513 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 BICDL2A1A5D9 508 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 KCNQ3O43525 872 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 ZNF189O75820 626 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 PHLDB3Q6NSJ2 640 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 CCDC80Q76M96 950 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 CCDC63Q8NA47 563 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 ZBTB10Q96DT7 871 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 TMOD4Q9NZQ9 345 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 PABPN1LA6NDY0 278 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 TCP11Q8WWU5 503 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 CCDC42Q96M95 316 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 FGD4Q96M96 766 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 CDCA7Q9BWT1 371 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 PFDN4Q9NQP4 134 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 GINS2Q9Y248 185 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 MAST1Q9Y2H9 1570 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 BLVRAP53004 296 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 SLFNL1Q499Z3 407 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 RINLQ6ZS11 566 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 C17orf50Q8WW18 174 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 SELENOOQ9BVL4 669 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 ABCC2Q92887 1545 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 CCDC169A6NNP5 214 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 TXKP42681 527 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 SV2BQ7L1I2 683 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 TGFBRAP1Q8WUH2 860 aa12.26□□□□□ -0.45
SMARCE1-202ENST00000348513 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 IQUBQ8NA54 791 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 SPATA5Q8NB90 893 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 ZNF280CQ8ND82 737 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 PHKBQ93100 1093 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 CLCN6P51797 869 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 GCKRQ14397 625 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 PLVAPQ9BX97 442 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 FAN1Q9Y2M0 1017 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 ZNF711Q9Y462 761 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 KRT5P13647 590 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 GSDMBQ8TAX9 411 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 ALDH3A1P30838 453 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 FBXO38Q6PIJ6 1188 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 APPBP2Q92624 585 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 ARHGEF2Q92974 986 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
SMARCE1-202ENST00000348513 CHL1O00533 1208 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 MRPS9P82933 396 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 ATP10AO60312 1499 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 FAM170AA1A519 330 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 TRAF5O00463 557 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 KIF5AQ12840 1032 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 NCAPH2Q6IBW4 605 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 PPP1R21Q6ZMI0 780 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 SH2D4AQ9H788 454 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 IMPACTQ9P2X3 320 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 BIRC3Q13489 604 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 LRRC45Q96CN5 670 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 PZPP20742 1482 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 MAP7D3Q8IWC1 876 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 LPIN2Q92539 896 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 NAPGQ99747 312 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
SMARCE1-202ENST00000348513 DEXIO95424 95 aa12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 PDE4DQ08499 809 aa12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 TBC1D7Q9P0N9 293 aa12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 GFM2Q969S9 779 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 CFAP43Q8NDM7 1665 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms