RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 PHBP35232 272 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 PDZD4Q76G19 769 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 KRT25Q7Z3Z0 450 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 POLKQ9UBT6 870 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 HADHQ16836 314 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 USP40Q9NVE5 1235 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 HMGB1P1B2RPK0 211 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 CCDC13Q8IYE1 715 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 MAP3K5Q99683 1374 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 PRDM1O75626 825 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 P3H4Q92791 437 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 HAUS1Q96CS2 278 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 LMCD1Q9NZU5 365 aa13.13□□□□□ -0.31
CACNA1C-204ENST00000347598 SCAF11Q99590 1463 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 SLC4A1P02730 911 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 KRT33BQ14525 404 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 MMEL1Q495T6 779 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 ALAS1P13196 640 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 GANCQ8TET4 914 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 KDRP35968 1356 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 RPS6KA1Q15418 735 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 NDUFAB1O14561 156 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 FLOT1O75955 427 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 SDCCAG3Q96C92 435 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 USH1CQ9Y6N9 552 aa13.12□□□□□ -0.31
CACNA1C-204ENST00000347598 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 KCNA4P22459 653 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 FBXW4P57775 412 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 CAPN12Q6ZSI9 719 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 U2AF1L4Q8WU68 220 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 TROVE2P10155 538 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 HP1BP3Q5SSJ5 553 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 ZNF594Q96JF6 807 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 TUBBP07437 444 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 KAZNQ674X7 775 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 RUFY4Q6ZNE9 571 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 CSRNP1Q96S65 589 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 BLZF1Q9H2G9 400 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 SUGCTQ9HAC7 445 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 FAM8A1Q9UBU6 413 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 TIMM10P62072 90 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 DBN1Q16643 649 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 CROCCP2Q86T23 111 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 SMYD2Q9NRG4 433 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 BAG2O95816 211 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 GARSP41250 739 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 RAPH1Q70E73 1250 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 SPATA17Q96L03 361 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 PIK3CAP42336 1068 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 ARPP19P56211 112 aa13.11□□□□□ -0.31
CACNA1C-204ENST00000347598 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms