RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 PEX10O60683 326 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
TPM4-202ENST00000344824 SLC3A2P08195 630 aaKnown RBP16.35■□□□□ 0.21
TPM4-202ENST00000344824 RASA1P20936 1047 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 HOXD10P28358 340 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
TPM4-202ENST00000344824 HERVK_113P62684 666 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 P2RX7Q99572 595 aaKnown RBP16.35■□□□□ 0.21
TPM4-202ENST00000344824 RPAP3Q9H6T3 665 aaPredicted RBP16.35■□□□□ 0.21
TPM4-202ENST00000344824 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
TPM4-202ENST00000344824 PLXNB2O15031 1838 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L15C9J2P7 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L13C9JLJ4 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L11C9JVI0 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L18D6R9N7 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L22D6RA61 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L17D6RBQ6 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L19D6RCP7 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L20D6RJB6 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 HOXA7P31268 230 aaPredicted RBP16.34■□□□□ 0.21
TPM4-202ENST00000344824 PRKCZQ05513 592 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 CTDSPL2Q05D32 466 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 PDE4BQ07343 736 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 USP17L24Q0WX57 530 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
TPM4-202ENST00000344824 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 RAET1EQ8TD07 263 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 C12orf42Q96LP6 360 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
TPM4-202ENST00000344824 TSHZ2Q9NRE2 1034 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 TOMM22Q9NS69 142 aa16.34■□□□□ 0.21
TPM4-202ENST00000344824 RLFQ13129 1914 aa16.33■□□□□ 0.21
TPM4-202ENST00000344824 RBBP6Q7Z6E9 1792 aaKnown RBP16.33■□□□□ 0.2
TPM4-202ENST00000344824 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
TPM4-202ENST00000344824 GNRH1P01148 92 aa16.33■□□□□ 0.2
TPM4-202ENST00000344824 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.2
TPM4-202ENST00000344824 PTH1RQ03431 593 aa16.33■□□□□ 0.2
TPM4-202ENST00000344824 CCAR1Q8IX12 1150 aaKnown RBP16.33■□□□□ 0.2
TPM4-202ENST00000344824 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
TPM4-202ENST00000344824 LSG1Q9H089 658 aaKnown RBP16.33■□□□□ 0.2
TPM4-202ENST00000344824 SRRDQ9UH36 339 aa16.33■□□□□ 0.2
TPM4-202ENST00000344824 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.2
TPM4-202ENST00000344824 FOXP2O15409 715 aa16.32■□□□□ 0.2
TPM4-202ENST00000344824 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
TPM4-202ENST00000344824 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
TPM4-202ENST00000344824 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
TPM4-202ENST00000344824 FAM47AQ5JRC9 791 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 CATSPERGQ6ZRH7 1159 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 COA7Q96BR5 231 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 TXNRD2Q9NNW7 524 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
TPM4-202ENST00000344824 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
TPM4-202ENST00000344824 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
TPM4-202ENST00000344824 PRMT2P55345 433 aa16.3■□□□□ 0.2
TPM4-202ENST00000344824 HAND2P61296 217 aa16.3■□□□□ 0.2
TPM4-202ENST00000344824 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
TPM4-202ENST00000344824 KIAA1755Q5JYT7 1200 aa16.3■□□□□ 0.2
TPM4-202ENST00000344824 GPRC5AQ8NFJ5 357 aa16.3■□□□□ 0.2
TPM4-202ENST00000344824 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
TPM4-202ENST00000344824 GOPCQ9HD26 462 aa16.3■□□□□ 0.2
TPM4-202ENST00000344824 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
TPM4-202ENST00000344824 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
TPM4-202ENST00000344824 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
TPM4-202ENST00000344824 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
TPM4-202ENST00000344824 FLOT1O75955 427 aa16.29■□□□□ 0.2
TPM4-202ENST00000344824 ERVK-9P63128 1117 aa16.29■□□□□ 0.2
TPM4-202ENST00000344824 ERVK-24P63145 666 aa16.29■□□□□ 0.2
TPM4-202ENST00000344824 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
TPM4-202ENST00000344824 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
TPM4-202ENST00000344824 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
TPM4-202ENST00000344824 FGAP02671 866 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 FLT3LGP49771 235 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 TFAP4Q01664 338 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 SIAH1Q8IUQ4 282 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
TPM4-202ENST00000344824 LPAR1Q92633 364 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 CEP95Q96GE4 821 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
TPM4-202ENST00000344824 INCENPQ9NQS7 918 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 RBM8AQ9Y5S9 174 aaKnown RBP16.28■□□□□ 0.2
TPM4-202ENST00000344824 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 MCCP23508 829 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 GRK4P32298 578 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
TPM4-202ENST00000344824 ADCY3O60266 1144 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 ELNP15502 786 aa16.27■□□□□ 0.19
TPM4-202ENST00000344824 PLS1Q14651 629 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms