RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
LMX1A-202ENST00000342310 HIBADHP31937 336 aaKnown RBP14.18□□□□□ -0.14
LMX1A-202ENST00000342310 CHMP4BP1P59074 171 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 SLC35F6Q8N357 371 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 STAG2Q8N3U4 1231 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 GOLGA6L1Q8N7Z2 621 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 MMRN2Q9H8L6 949 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 KANSL2Q9H9L4 492 aa14.18□□□□□ -0.14
LMX1A-202ENST00000342310 ABL1P00519 1130 aa14.17□□□□□ -0.14
LMX1A-202ENST00000342310 RGS22Q8NE09 1264 aa14.17□□□□□ -0.14
LMX1A-202ENST00000342310 PAGE5Q96GU1 130 aa14.17□□□□□ -0.14
LMX1A-202ENST00000342310 FBXO2Q9UK22 296 aaPredicted RBP14.17□□□□□ -0.14
LMX1A-202ENST00000342310 PNMA6AP0CW24 399 aaPredicted RBP14.17□□□□□ -0.14
LMX1A-202ENST00000342310 CLEC10AQ8IUN9 316 aa14.17□□□□□ -0.14
LMX1A-202ENST00000342310 NFAT5O94916 1531 aa14.17□□□□□ -0.14
LMX1A-202ENST00000342310 RBM5P52756 815 aaKnown RBP eCLIP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 TDRD12Q587J7 1177 aaKnown RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 ZSCAN29Q8IWY8 852 aaPredicted RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 MAP3K14Q99558 947 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 PARD6BQ9BYG5 372 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 IKBKBO14920 756 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 CCNT1O60563 726 aaKnown RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 LIFRP42702 1097 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 MECOMQ03112 1051 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 GJA10Q969M2 543 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 FAM207AQ9NSI2 230 aaPredicted RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 FRMPD2Q68DX3 1309 aaPredicted RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 FMN2Q9NZ56 1722 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 GNAT2P19087 354 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 ITPK1Q13572 414 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 UTP14CQ5TAP6 766 aaKnown RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 DTHD1Q6ZMT9 781 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 PTF1AQ7RTS3 328 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 TXNRD3Q86VQ6 643 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 GPCPD1Q9NPB8 672 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 ZNHIT6Q9NWK9 470 aaKnown RBP14.16□□□□□ -0.14
LMX1A-202ENST00000342310 RGPD1P0DJD0 1748 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 TNS3Q68CZ2 1445 aa14.16□□□□□ -0.14
LMX1A-202ENST00000342310 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 TECP42680 631 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 FXR1P51114 621 aaKnown RBP eCLIP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 RPS8P62241 208 aaKnown RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 GPS2Q13227 327 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 TERF2Q15554 542 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 CCDC122Q5T0U0 273 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 KANK3Q6NY19 840 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 INTS13Q9NVM9 706 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 CPDO75976 1380 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 PSDA5PKW4 1024 aaPredicted RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 IL6STP40189 918 aaPredicted RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 TNNI2P48788 182 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 STIM1Q13586 685 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 SRBD1Q8N5C6 995 aaKnown RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 PNMA1Q8ND90 353 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 GOLGA1Q92805 767 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 SPTY2D1Q68D10 685 aaPredicted RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 RAD9BQ6WBX8 426 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 GSPT2Q8IYD1 628 aaKnown RBP14.15□□□□□ -0.14
LMX1A-202ENST00000342310 TC2NQ8N9U0 490 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 CHP1Q99653 195 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
LMX1A-202ENST00000342310 SLIT1O75093 1534 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 ADAMTS3O15072 1205 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 CXCR5P32302 372 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 PLCD1P51178 756 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 SF3A3Q12874 501 aaKnown RBP eCLIP14.14□□□□□ -0.15
LMX1A-202ENST00000342310 PAK1Q13153 545 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
LMX1A-202ENST00000342310 SLC39A2Q9NP94 309 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 ZNF446Q9NWS9 450 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 CCDC47Q96A33 483 aaKnown RBP14.14□□□□□ -0.15
LMX1A-202ENST00000342310 SRPRBQ9Y5M8 271 aaKnown RBP14.14□□□□□ -0.15
LMX1A-202ENST00000342310 ST5P78524 1137 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 PDE4DQ08499 809 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 MORC3Q14149 939 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 LRRC41Q15345 812 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 CSGALNACT2Q8N6G5 542 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 FOXP1Q9H334 677 aaPredicted RBP14.14□□□□□ -0.15
LMX1A-202ENST00000342310 PDE11AQ9HCR9 933 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 TCP11L1Q9NUJ3 509 aa14.14□□□□□ -0.15
LMX1A-202ENST00000342310 LUC7L2Q9Y383 392 aaKnown RBP14.14□□□□□ -0.15
LMX1A-202ENST00000342310 UTRNP46939 3433 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 CTAGE15A4D2H0 777 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 B4DLN1 442 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 KCNJ18B7U540 433 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 CTAGE8P0CG41 777 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 SCG2P13521 617 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 ARID4AP29374 1257 aaPredicted RBP14.13□□□□□ -0.15
LMX1A-202ENST00000342310 KCNJ12Q14500 433 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 TAF3Q5VWG9 929 aa14.13□□□□□ -0.15
LMX1A-202ENST00000342310 CTAGE6Q86UF2 777 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms