RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PNKPQ96T60 521 aa16.29■□□□□ 0.2
CPSF7-201ENST00000340437 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
CPSF7-201ENST00000340437 CDHR2Q9BYE9 1310 aa16.29■□□□□ 0.2
CPSF7-201ENST00000340437 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
CPSF7-201ENST00000340437 FGFR2P21802 821 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 NELFBQ8WX92 580 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
CPSF7-201ENST00000340437 CHP1Q99653 195 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 PP2D1A8MPX8 630 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 H3BQF6 201 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 EXOC5O00471 708 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 MFAP3LO75121 409 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 GYPCP04921 128 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 CYP2D6P10635 497 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 GNAT2P19087 354 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 ERCC5P28715 1186 aaPredicted RBP16.28■□□□□ 0.2
CPSF7-201ENST00000340437 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
CPSF7-201ENST00000340437 ADD3Q9UEY8 706 aaKnown RBP16.28■□□□□ 0.2
CPSF7-201ENST00000340437 PKN1Q16512 942 aa16.27■□□□□ 0.2
CPSF7-201ENST00000340437 SRGAP2O75044 1071 aa16.27■□□□□ 0.2
CPSF7-201ENST00000340437 FUT8Q9BYC5 575 aa16.27■□□□□ 0.2
CPSF7-201ENST00000340437 TSPY2A6NKD2 308 aa16.27■□□□□ 0.19
CPSF7-201ENST00000340437 PPP1R3GB7ZBB8 358 aa16.27■□□□□ 0.19
CPSF7-201ENST00000340437 IRX5P78411 483 aaPredicted RBP16.27■□□□□ 0.19
CPSF7-201ENST00000340437 TSR1Q2NL82 804 aaKnown RBP16.27■□□□□ 0.19
CPSF7-201ENST00000340437 FKBP15Q5T1M5 1219 aa16.27■□□□□ 0.19
CPSF7-201ENST00000340437 TRIML1Q8N9V2 468 aa16.27■□□□□ 0.19
CPSF7-201ENST00000340437 CDC23Q9UJX2 597 aa16.27■□□□□ 0.19
CPSF7-201ENST00000340437 PHRF1Q9P1Y6 1649 aaKnown RBP16.26■□□□□ 0.19
CPSF7-201ENST00000340437 CTAGE15A4D2H0 777 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 CTAGE8P0CG41 777 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 CTAGE6Q86UF2 777 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 CTAGE4Q8IX94 777 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 IQUBQ8NA54 791 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
CPSF7-201ENST00000340437 MRPS25P82663 173 aaKnown RBP16.26■□□□□ 0.19
CPSF7-201ENST00000340437 RSRC2Q7L4I2 434 aaKnown RBP16.26■□□□□ 0.19
CPSF7-201ENST00000340437 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 RNF26Q9BY78 433 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-201ENST00000340437 PLEKHA4Q9H4M7 779 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 ADAM21Q9UKJ8 722 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 KCNJ18B7U540 433 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 STAT6P42226 847 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 ERVK-24P63145 666 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 KCNJ12Q14500 433 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 CNGA4Q8IV77 575 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-201ENST00000340437 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
CPSF7-201ENST00000340437 ANKRD65E5RJM6 399 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 PAK1Q13153 545 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 PANX2Q96RD6 677 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 MYO1BO43795 1136 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 COPB1P53618 953 aaKnown RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 SRBD1Q8N5C6 995 aaKnown RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 NOA1Q8NC60 698 aaKnown RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 NAPGQ99747 312 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 GNL3LQ9NVN8 582 aaKnown RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-201ENST00000340437 HSP90B2PQ58FF3 399 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 C10orf67Q8IYJ2 551 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 CEP112Q8N8E3 955 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 AK7Q96M32 723 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 CPVLQ9H3G5 476 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 KCPQ6ZWJ8 1503 aa16.25■□□□□ 0.19
CPSF7-201ENST00000340437 CAPN2P17655 700 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 VSNL1P62760 191 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 ZSCAN26Q16670 478 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 KIAA1328Q86T90 577 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 GSDMAQ96QA5 445 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 PHF20Q9BVI0 1012 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 FAN1Q9Y2M0 1017 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 RTL9Q8NET4 1388 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 XDHP47989 1333 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 ERLIN1O75477 346 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 RABEP2Q9H5N1 569 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 ANKZF1Q9H8Y5 726 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
CPSF7-201ENST00000340437 PRCPP42785 496 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.19
CPSF7-201ENST00000340437 SEC23AQ15436 765 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 PSMB7Q99436 277 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-201ENST00000340437 APTXQ7Z2E3 356 aaKnown RBP16.23■□□□□ 0.19
CPSF7-201ENST00000340437 TXLNBQ8N3L3 684 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 UIMC1Q96RL1 719 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 ABHD10Q9NUJ1 306 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 ZNF335Q9H4Z2 1342 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-201ENST00000340437 MACROD2A1Z1Q3 448 aa16.23■□□□□ 0.19
CPSF7-201ENST00000340437 KLRK1P26718 216 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms