RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 GDAQ9Y2T3 454 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 KIF5AQ12840 1032 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 TGFBRAP1Q8WUH2 860 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 NOC4LQ9BVI4 516 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 BAG3O95817 575 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 PTPREP23469 700 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 CALML3P27482 149 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 CASP7P55210 303 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 TXLNBQ8N3L3 684 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 IGDCC4Q8TDY8 1250 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 FOXP1Q9H334 677 aaPredicted RBP12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 EPB41L4AQ9HCS5 686 aaPredicted RBP12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 MEGF6O75095 1541 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 LIFRP42702 1097 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 PAFAH1B1P43034 410 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 CYP26C1Q6V0L0 522 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
SEMA4D-201ENST00000339861 KRT86O43790 486 aa12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 LDHBP07195 334 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 MAP9Q49MG5 647 aa12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 DYNLL2Q96FJ2 89 aa12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 PAGE5Q96GU1 130 aa12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 NGLY1Q96IV0 654 aa12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.42
SEMA4D-201ENST00000339861 TRIM49BA6NDI0 452 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 SMIM22K7EJ46 135 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 ARID4AP29374 1257 aaPredicted RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 HDXQ7Z353 690 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 GNPATO15228 680 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 TMEM266Q2M3C6 531 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 ODF2Q5BJF6 829 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 NCAPH2Q6IBW4 605 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 SRPRBQ9Y5M8 271 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 LONRF2Q1L5Z9 754 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 GPR101Q96P66 508 aaPredicted RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 PP2D1A8MPX8 630 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 TMCO5BA8MYB1 307 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 SCG2P13521 617 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 CUL4BQ13620 913 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 IL17RAQ96F46 866 aa12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 TTF2Q9UNY4 1162 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-201ENST00000339861 PNMA1Q8ND90 353 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 IFT81Q8WYA0 676 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 TECP42680 631 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 COPB1P53618 953 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 SIK1P57059 783 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 JAKMIP2Q96AA8 810 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 NLRC4Q9NPP4 1024 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 BIN2Q9UBW5 565 aaPredicted RBP12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 C3P01024 1663 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 B4DLN1 442 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 AMPD3Q01432 767 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 IQCEQ6IPM2 695 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 PHLPP2Q6ZVD8 1323 aa12.44□□□□□ -0.42
SEMA4D-201ENST00000339861 RPN1P04843 607 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 RFC4P35249 363 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 ZNF76P36508 570 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 NCAPHQ15003 741 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 SYCP1Q15431 976 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 MEX3CQ5U5Q3 659 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 BLIDQ8IZY5 108 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 TAF4BQ92750 862 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 TSG101Q99816 390 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 SLC39A2Q9NP94 309 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 PRDX5P30044 214 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 RNF26Q9BY78 433 aaPredicted RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 MRPL44Q9H9J2 332 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 RFX7Q2KHR2 1363 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
SEMA4D-201ENST00000339861 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms