RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 SRRTQ9BXP5 876 aaKnown RBP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 GOLGA6L9A6NEM1 432 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 PSMB7Q99436 277 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 FAM170AA1A519 330 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 CTAGE9A4FU28 777 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 ZMYND10O75800 440 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 ABL1P00519 1130 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 INF2Q27J81 1249 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 CRNKL1Q9BZJ0 848 aaKnown RBP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 VPS18Q9P253 973 aa13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 FGFR2P21802 821 aa13.33□□□□□ -0.27
EFCAB13-201ENST00000331493 ALX1Q15699 326 aa13.33□□□□□ -0.27
EFCAB13-201ENST00000331493 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.27
EFCAB13-201ENST00000331493 TRIM10Q9UDY6 481 aa13.33□□□□□ -0.27
EFCAB13-201ENST00000331493 FHOD1Q9Y613 1164 aa13.33□□□□□ -0.27
EFCAB13-201ENST00000331493 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 MRPS25P82663 173 aaKnown RBP13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 PPARDQ03181 441 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 GPS2Q13227 327 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNF34Q8IZ26 560 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 SRBD1Q8N5C6 995 aaKnown RBP13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 MED15Q96RN5 788 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 ST5P78524 1137 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 PAK1Q13153 545 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 LETM2Q2VYF4 491 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 SLC44A5Q8NCS7 719 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNF652Q9Y2D9 606 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 IDEP14735 1019 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 PLA2G4AP47712 749 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 KRT31Q15323 416 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 NCAPH2Q6IBW4 605 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNF444Q8N0Y2 327 aaPredicted RBP13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 PLEKHA4Q9H4M7 779 aa13.33□□□□□ -0.28
EFCAB13-201ENST00000331493 USP17L3A6NCW0 530 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 USP17L4A6NCW7 530 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 USP17L1Q7RTZ2 530 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 MACROD2A1Z1Q3 448 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 H2AFXP16104 143 aaPredicted RBP13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 MTIF2P46199 727 aaKnown RBP13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 SCG2P13521 617 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 MECOMQ03112 1051 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 NR1I3Q14994 352 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 CHP1Q99653 195 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 ADGRG1Q9Y653 693 aa13.32□□□□□ -0.28
EFCAB13-201ENST00000331493 DPYDQ12882 1025 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 ITPK1Q13572 414 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 DTHD1Q6ZMT9 781 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 MAPKAPK5Q8IW41 473 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 STK36Q9NRP7 1315 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CTAGE15A4D2H0 777 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CTAGE8P0CG41 777 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 HIBADHP31937 336 aaKnown RBP13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 PKN1Q16512 942 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CC2D1AQ6P1N0 951 aaPredicted RBP13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CTAGE6Q86UF2 777 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 CTAGE4Q8IX94 777 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 ZHX3Q9H4I2 956 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 RABEP2Q9H5N1 569 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 PDE11AQ9HCR9 933 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 SRGAP2O75044 1071 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 ASIC1P78348 528 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 STIM1Q13586 685 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 GPR161Q8N6U8 529 aaKnown RBP13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 JADE2Q9NQC1 790 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 HDAC6Q9UBN7 1215 aa13.31□□□□□ -0.28
EFCAB13-201ENST00000331493 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 COPB1P53618 953 aaKnown RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 TMEM139Q8IV31 216 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 TGFBRAP1Q8WUH2 860 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms